<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05125

Description Uncharacterized protein
SequenceMVVACLSVSALQFNPIWMQQQHSHSATTTTTAAALSFLDQLRDQLISAVSNGNLLGIKDAIAYLEKTNLTREQLEKTRIGGAVNNARRSVAEKDAELAKRCRTLIKQWQKIVEFRSTSSSGSNSNSCTPNLQSPNDTLRKNITPSPSRSRIASNGTKGISPLVSDEGYAPISRRITPGIEESYAPPSQRRITTPINDHVMTKSLSMVDLSRKIVSDNSSNSNANNHKLKRSGEANGLNSVIAKRVKIANVSQLPTSSLVPHQTVSEARRANVQSTSVLLAQLTENLPQSLAINLTQNQRKAQQEKLKGNSGRENPLLFIFNENGENKEEVNNTASNNMAPPIKNGKYDWNAILPTLDALRKRTQFFARRTPDPSKLYMIEARGGRKVLLLPYVDIGQPDFLEYGYPNQSKYYAEENFMYGEPRPK
Length425
PositionUnknown
OrganismDracunculus medinensis (Guinea worm)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Dracunculoidea> Dracunculidae> Dracunculus.
Aromaticity0.05
Grand average of hydropathy-0.614
Instability index54.75
Isoelectric point9.80
Molecular weight47108.63
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05125
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.64|      24|      37|     352|     377|       1
---------------------------------------------------------------------------
  352-  377 (38.39/28.94)	ILPTLDAlrKRTQFFARRTPDPSKLY
  389-  412 (46.25/28.68)	LLPYVDI..GQPDFLEYGYPNQSKYY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.66|      10|      96|     116|     125|       5
---------------------------------------------------------------------------
  116-  125 (18.27/10.09)	STSSSGSNSN
  215-  224 (17.40/ 9.25)	SDNSSNSNAN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05125 with Med26 domain of Kingdom Metazoa
Unable to open file!