<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP05123

Description Uncharacterized protein
SequenceMASHGYLSSGSGSSQMTQNFNSQEQLNPSGALPNYTSPQPIIIPQPNSVEPLVHQVSSSHQKGPSSVPSAIYTQHHVSEEISQINQDGNDKAASEEPLFSQKFEILKSYYDQVKRLIDRHKLDGLPVKTSFERLIEILENRRKIDLKFVEKLIVSVKTMIQRGSVCYPILEVLRSDETIRPILPDPWADLRQYAIKLIVKRKRASTAVVDAKRAKWESAESAIAVDCCDGSKIFLSEEASDDLRKYKYRFHPDFAPISSECSEVTVFIENDALLVPPMRLIIPTNYPENGAYLSNDQWSKNRGCYEYIYKQFEKRLCMASNRRSISEIASAWKIASEHVICVRDEPFGILFD
Length352
PositionTail
OrganismDracunculus medinensis (Guinea worm)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Dracunculoidea> Dracunculidae> Dracunculus.
Aromaticity0.09
Grand average of hydropathy-0.426
Instability index52.16
Isoelectric point6.48
Molecular weight39962.94
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP05123
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     135.30|      42|      42|     113|     154|       1
---------------------------------------------------------------------------
  113-  154 (68.09/56.04)	VKRLIDRHKL..DGLPVKTSFERLIEILENRRKIDLKFVEKLIV
  156-  199 (67.21/55.22)	VKTMIQRGSVcyPILEVLRSDETIRPILPDPWADLRQYAIKLIV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.33|      15|      23|      55|      69|       2
---------------------------------------------------------------------------
   55-   69 (25.86/16.36)	QVSSSHQKGPSSVPS
   80-   94 (24.47/15.11)	EISQINQDGNDKAAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP05123 with Med15 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MASHGYLSSGSGSSQMTQNFNSQEQLNPSGALPNYTSPQPIIIP
1
44










Molecular Recognition Features






MoRF SequenceStartStop




NANANA