<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04913

Description Uncharacterized protein
SequenceMVDGRRRIERRLFSFELLSSSLIAINDGLLLPCARLSVVASPTPQLFSDAPLLSAHGEWRPVESGCRLPAAFCLRFSRPIIFSAESLKKLSSIAAFPLTIEGGLNIYEYLLNDDDVRNDLQVSLPGCPTQRYILDQSMLSSHDDGIVREVTFMHPRDVVLIVETVRTQLAHNALFESLVRAHNANASMNGAVEIRLTSASIYSYDLVFTFRRTAFIARVNVSAAKMGVSLECIATGGILPETQHASSILANSLIAARVNVSAAKMGVSLECIATGGILPETQHASSILAKSWSLAVMMRGVLRRGGAGGMQMPSEEAVLAMHSNVTDGKDVKISQCWLPVASTAEHTKHSFEFVIADEDTPEGTRSMLALFKELDQVDELIPPPVQPPGTHTPSAPPRIGETLAPRTNRIHSENTMTINALSDLDAICDMAANIDDGESNVSEHSGRSSIVERCSPSAVEAQRLRAQVPPQSPSSNSDRYRSAQMSSISQLSPLEIARQRLAQQTPLSNAADVFEFDDPPRMPSTSAFSTPSQFHFPGGAQASYQFPAMQ
Length550
PositionMiddle
OrganismAscaris lumbricoides (Giant roundworm)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Spirurina> Ascaridomorpha> Ascaridoidea> Ascarididae> Ascaris.
Aromaticity0.06
Grand average of hydropathy-0.081
Instability index53.47
Isoelectric point5.65
Molecular weight59652.10
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04913
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.77|      36|      36|     217|     252|       1
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  217-  252 (74.04/46.55)	ARVNVSAAKMGVSLECIATGGILPETQHASSILANS
  256-  291 (73.73/46.33)	ARVNVSAAKMGVSLECIATGGILPETQHASSILAKS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      62.06|      13|      16|     455|     467|       3
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  455-  467 (22.97/12.38)	SPSAVEAQRLR.AQ
  472-  484 (17.65/ 7.95)	SPSS.NSDRYRsAQ
  492-  504 (21.44/11.11)	SPLEIARQRLA.QQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.50|      16|     121|     396|     411|       4
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  396-  411 (30.97/19.40)	PPRIGETLAPRT.NRIH
  519-  535 (27.52/16.41)	PPRMPSTSAFSTpSQFH
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.97|      24|      84|      35|      58|       5
---------------------------------------------------------------------------
   35-   58 (40.83/23.62)	RLSVVASPTPQLFSDAPLLSAHGE
  121-  144 (44.15/26.11)	QVSLPGCPTQRYILDQSMLSSHDD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04913 with Med1 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AANIDDGESNVSEHSGRSSIVERCSPSAVEAQRLRAQVPPQSPSSNSDRYRSAQMSSIS
2) DELIPPPVQPPGTHTPSAPPRIGETLAPRTNRIHSENTM
431
378
489
416










Molecular Recognition Features






MoRF SequenceStartStop




NANANA