<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04889

Description Uncharacterized protein
SequenceMRNVLNCSAFHGCECSTTRPFDLTGARSFSLKGTRHFGLTSIQSFGLTSTRSFGLTSTRPFGLTGARPLRPRLLDIRPFNIYCSAFHGLKYSNIRPFGLTGIRSFGLHVFGPSASTARSFMASDDKILRTNHLADVSLSFKETWGPSPGTPSSTPSGSVVPAAQHTWVQKIERDGRSRRLELLGAKNRVGLSFLPPSNPRYEKPSETVVLVAWNSHVRKTERVGLSRYLATLGAKKRARRSFSSLGTSRCEKPSESVVLAAQDTWVRGNRARRSFSSPRALGWGVDALATLAYFAVLCGAFAWGVDSSSLASKRRPKVLETEQWVETVERGGSCTCFVVLHRFGGEICDVRERFLEVLLHELRIHHQRFPSLAHASRLQEVVNLNPSQDDHQIIRP
Length396
PositionTail
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.09
Grand average of hydropathy-0.283
Instability index50.54
Isoelectric point10.53
Molecular weight43925.56
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04889
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     115.25|      11|      14|      19|      29|       1
---------------------------------------------------------------------------
   19-   29 (24.31/12.94)	RPFDLTGARSF
   35-   45 (22.39/11.38)	RHFGLTSIQSF
   59-   69 (23.56/12.33)	RPFGLTGARPL
   70-   79 (19.10/ 8.69)	RP.RLLDIRPF
   95-  105 (25.89/14.23)	RPFGLTGIRSF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     135.31|      27|      32|     218|     244|       2
---------------------------------------------------------------------------
  169-  195 (44.39/23.68)	QKIERDGRSRRLELLGAKNRVGLSFLP
  218-  244 (47.77/25.95)	RKTERVGLSRYLATLGAKKRARRSFSS
  252-  277 (43.16/22.85)	KPSESVVLAAQ.DTWVRGNRARRSFSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.37|      10|      31|     110|     119|       3
---------------------------------------------------------------------------
  110-  119 (18.81/ 8.54)	FGPSASTARS
  144-  153 (22.56/11.57)	WGPSPGTPSS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04889 with Med33 domain of Kingdom Viridiplantae
Unable to open file!