<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04880

Description Uncharacterized protein
SequenceMASPAWLPQEAKPPVSGETSLPMASPTPNSAHATPSTAPAAAPPFPHGVLQNANVSGSPQLSSTHNVIKSNSTVNPVVFQPPVPGVSSHAALSFSYNVPQSGGAFSSSQQHTQSSGKISESVAQDVTKLSSAASTPHSIPAHTSTTIMPPSDPNYRPTTSWMPTAMSFPLHPVMPTPGNPGPPGLTSSSIISINTVVPSTGTDSSSAALPRPNMPISAIASDPTAPLKGLPYPSMPSMAAPPQGLWLQAPQMSGVFRPPYLQYPAPFPGPFPFPARGITLPAVPIPDSQPPGVTPVSGGGGTSTPASSNQLRGTTALQTEVISGPADDKKKLNAVVTQNEDAANNDQLEAWTAHKTEAGIIYYYNALTGESTYDKPAGFIGEPHQVSAQPTPVSMMDLPGTDWLSVSTSDGKKYYYNNRTKTSCWQIPNEVSELKKKQDGDVTKDQLMSVPNTNVLSDRGSGMVTLNAPAINTGGRDAAALKPSNLQSPSSALDLIKKKLQDSGTPITSSSIPVPSVQTGSESNGSKAVESTSKGMQADNSKDKQKDTNGAANVSDTSSDSEDEDSGPSKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEALEDINYNTDYQTFRKKWGNDPRFEALDRKEQEHLLNERVLPLKKAAEEKTQAMRAAAAASFKSMLKERGDISFNSRWSRVKESLRDDPRYKSVRHEDREGLFNEYISELKAAEYATERETKAKREEQDKLRERERELRKRKEREEQEMERVRLKIRRKEAVTSFQALLVETIKDPLASWTESKPKLEKDPQGRATNPELDSSDTEKLFREHVKMLQERCAHEFRVLLAEVLTTDAASHENEDGKTVLNSWSTAKRVLKSDPRYNKVPRKEREALWRRYAEDMLRRQKASHSHDSREDKHTDAKGRNSLESSKHPLESGRSHDRR
Length975
PositionUnknown
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.06
Grand average of hydropathy-0.797
Instability index53.45
Isoelectric point8.57
Molecular weight107098.42
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04880
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     363.52|      65|      65|     630|     694|       1
---------------------------------------------------------------------------
  600-  655 (63.44/35.22)	.......VF.............D...PRFKA....I.PSYSARRS...LFEHYVKTR....aeeeRKEKRAAQKA..A......IEGFKQLLDEAL.EDI
  656-  722 (96.17/57.36)	NYNTDYQTFRKKWG.......ND...PRFEA....L.DRKEQEHL...LNERVLPLK....kaaeEK.TQAMRAA..A......AASFKSMLKER..GDI
  723-  761 (41.91/20.66)	SFNSRWSRVKESLR.......DD...PRYKS....V.RHEDREGL...FNEYISELK...........................................
  764-  825 (50.71/26.61)	EYATERETKAKREE.......QDklrERERE....LrKRKEREEQ...EMERV.RLK.....................irrkeaVTSFQALLVETI.KD.
  826-  886 (54.65/29.27)	.PLASWTESKPKLE.......KD...PQGRAtnpeL.DSSDTEKL...FREHVKMLQ.....ercAHEFRV...................LLAEVLtTDA
  889-  967 (56.64/30.62)	HENEDGKTVLNSWStakrvlkSD...PRYNK....V.PRKEREALwrrYAEDMLRRQkashshdsREDKHTDAKGrnS......LESSKHPLE.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     261.93|      36|      37|      25|      60|       2
---------------------------------------------------------------------------
    2-   29 (31.09/10.56)	...ASPAWLP...........QE.AKP...P............VSGEtslPM................aS....................P.TPN
   30-   66 (62.60/29.17)	SAHATPSTAP...........AA.APP..FP.HG..V.LQNANVSGS...PQ................lS....................S.THN
   67-  114 (30.12/ 9.98)	VIKSNSTVNP...........VVfQPP..VP..G..V.SSHAALSFSynvPQ........sggafsssqQ....................H.TQS
  115-  153 (24.01/ 6.38)	SGKISESVAQ......dvtklSS.AAS..TP.HS..I.............PA..........htsttimP....................P.SDP
  154-  213 (40.27/15.98)	NYRPTTSWMP...........TA.M.S..FPlHP..V.MPTPGNPGP...PG.............ltssSiisintvvpstgtdsssaalP.RPN
  217-  273 (24.43/ 6.62)	SAIASDPTAPlkglpypsmpsMA.AP....P.QG..LwLQ......A...PQmsgvfrppylqypapfpG....................P.FPF
  274-  296 (24.22/ 6.50)	PARGI..TLP...........AV.PIPdsQP.PG.........................................................vTPV
  297-  324 (25.19/ 7.07)	SGGGGTST.P...........AS.SNQ..L..RGttA.LQTEVISG.................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     126.95|      30|      96|     369|     398|       3
---------------------------------------------------------------------------
  369-  398 (52.34/27.99)	GESTYDK......................PAGFIGEPHQVSAQP....TPVSMMDL
  405-  434 (46.71/24.18)	SVSTSDG......................KKYYYNNRTKTSCWQ....IPNEVSEL
  440-  495 (27.91/11.46)	GDVTKDQlmsvpntnvlsdrgsgmvtlnaPAINTGGRDAAALKPsnlqSPSSALDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.94|      20|      22|     522|     541|       7
---------------------------------------------------------------------------
  522-  541 (33.00/19.67)	ESNGSKAVESTSKGMQADNS
  547-  566 (32.94/19.62)	DTNGAANVSDTSSDSEDEDS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04880 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DSGTPITSSSIPVPSVQTGSESNGSKAVESTSKGMQADNSKDKQKDTNGAANVSDTSSDSEDEDSGPSKEECI
2) EYATERETKAKREEQDKLRERERELRKRKEREEQ
3) IPNEVSELKKKQDGDVTKDQLMSVPNTNVLSDRGSGMVTLNAPAINTGGRDAAALKPSNLQSPSSALDLIKKKL
4) ITLPAVPIPDSQPPGVTPVSGGGGTSTPASSNQLRGTTALQTEVISGPADDKKKLNAVVTQNEDAANNDQLEA
5) LWRRYAEDMLRRQKASHSHDSREDKHTDAKGRNSLESSKHPLESGRSHDRR
6) MASPAWLPQEAKPPVSGETSLPMASPTPNSAHATPSTAPAAAPPFPHGVLQNANVSGSPQLSSTHNVIKSNSTVNPVVFQPP
7) MSFPLHPVMPTPGNPGPPGLTSSSIISINTVVPSTGTDSSSAALPRPNMPISAIASDPTAPLKGLPYPSM
8) VPQSGGAFSSSQQHTQSSGKISESVAQDVTKLSSAASTPHSIPAHTSTTIMPPSDPNYRPTTSWM
502
764
427
278
925
1
166
98
574
797
500
350
975
82
235
162










Molecular Recognition Features






MoRF SequenceStartStop




1) ALWRRYA
924
930