<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04863

Description Uncharacterized protein
SequenceMAEFQLIVVVESTAAMGPYWETVLMDYLDKMIRSFGVNDSTGQKSSAPNVEFALITYNTHGCYSGCLVQRTGWTRDPDVFFLWLSSIPFNGGGFNDAAIAEGLSEALMMFPNSQSGGPNQQSVDMHKHCILIAASNPYPLQTPVYVPRPQNLEQSETIDSDSGNRLYDAEAVAKAFPQFSISLSVICPKQLPKIKAIYNAGKRSNRAADPPLEVKTPHFLILISEGFREARIALSRSGITSLPSNQSPVKVDTIPVTPVTGAPPTAMPSVNGSIANRQPVPAGNVAPPATVKVEQVPLTSVVTGPSFPHNSSVPRANSTSQGVPSLQTSSPSSVSQDIITNNENTQDTKPTVSMLQPLRPVNPTQANVSILNNLSQARQVLSSASLSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSVPAAQNVFSSGQSGITSITSSGPLSVPAQVGQNPGLSSLTSNTSNLSSSSNIGISQPLGNLQGAVSMGQQASGMSQGNLSGPQMVQGGVPMSQNALSGGLGPSVVSSGNGTMIPTPGMSQQQSGMQPIGNNAAANMPLSQQTSGGMQSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSASETLAANWPSVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLVQLQEKKLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGDMVVFKPQLSSQQQQQMQQQHQQMQSQQQHLPQLQQQQPLPHMQQQQLPQMQQQQQQLPQLQQQQQLPQVQQQQQQLSQLQQQQLPQIQQQQQLPQLQQQIPQLQQQQQLPQIQQLQPQQQQMVGAGMGQAYVQGPGRSQLVSQGQVSSQGTTNIGGGGFMS
Length845
PositionUnknown
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.05
Grand average of hydropathy-0.360
Instability index65.40
Isoelectric point8.82
Molecular weight90568.29
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:EnsemblPlants

GO - Biological Function
DNA binding	GO:0003677	IEA:EnsemblPlants

GO - Biological Process
defense response to fungus	GO:0050832	IEA:EnsemblPlants
jasmonic acid mediated signaling pathway	GO:0009867	IEA:EnsemblPlants
positive regulation of defense response	GO:0031349	IEA:EnsemblPlants
positive regulation of flower development	GO:0009911	IEA:EnsemblPlants
positive regulation of transcription, DNA-templated	GO:0045893	IEA:EnsemblPlants
red, far-red light phototransduction	GO:0009585	IEA:EnsemblPlants
response to far red light	GO:0010218	IEA:EnsemblPlants
response to red light	GO:0010114	IEA:EnsemblPlants
trichome branching	GO:0010091	IEA:EnsemblPlants
trichome papilla formation	GO:1905499	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04863
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     366.72|      51|      51|     695|     745|       1
---------------------------------------------------------------------------
  419-  472 (39.97/ 6.75)	........PAAQNvF.SSGQSGI..TSITSSGPLsvpaqvgqnPGLSSLTS.....NTSNLSSSS.....NIGIS
  484-  536 (48.53/ 9.81)	......MGQQASG.M.S..QGNLsgPQM.VQGGV.........P.MSQNALsgglgPSV.VSSGNgtmipTPGMS
  537-  580 (62.25/14.71)	QQQ.SGMQPIGNN.....AAANM..P.LSQQTS..........GGMQSSQS.....KYVKVWEGS.....LSG..
  695-  745 (99.21/27.91)	QQQ.QQMQQQHQQ.M.QSQQQHL..PQLQQQQPL.........PHMQQQQL.....PQMQQQQQQ.....LPQLQ
  747-  794 (67.76/16.68)	QQQlPQVQQQQQQ.LsQLQQQQL..PQIQQQQQL.........PQL.QQQI.....PQL.QQQQQ.....LP...
  795-  833 (49.01/ 9.98)	.QI.QQLQPQQQQ.M...VGAGM..GQAYVQGP.............GRSQL....vSQGQVSSQ...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     166.17|      37|      37|     181|     217|       2
---------------------------------------------------------------------------
  181-  217 (60.04/27.25)	IS.LSVICPKQLPKIK.AI......YNAG.KRSNRAAD..PPLEVKT.P
  221-  255 (34.27/12.61)	IL.IS....EGFREARiAL......SRSG.ITSLPSNQ..SPVKVDTiP
  256-  288 (44.00/18.14)	VTpVTGAPPTAMPSV...........N.G.SIANRQPV..PAGNVAP.P
  291-  331 (27.87/ 8.97)	VK.V.....EQVPLTS.VVtgpsfpHNSSvPRANSTSQgvPSLQTSS.P
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     174.02|      55|     270|      74|     144|       3
---------------------------------------------------------------------------
   74-  144 (85.35/71.42)	TRD..PDVFFLWlSSIPFNGGGFNdAAIAEGLSEALMMFPN.SQSGGPNQQSVDMHkhciliaasnpyplQTPV
  345-  402 (88.67/44.17)	TQDtkPTVSMLQ.PLRPVNPTQAN.VSILNNLSQARQVLSSaSLSGGTSMGLPSMG..............QTPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.11|      30|      49|     609|     638|       4
---------------------------------------------------------------------------
  609-  638 (53.29/34.58)	P..........SVMQIVRLISQD...HMNNKQY..VG...KADFLVFR
  642-  689 (29.83/16.00)	PhgflvqlqekKLCAVIQLPSQTlllSVSDKAFrlIGmlfPGDMVVFK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04863 with Med25 domain of Kingdom Viridiplantae
Unable to open file!