<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04854

Description Uncharacterized protein
SequenceMELLKPLHPHHAPILCLPFHGHPSSSQSQSQLPLPMPPKVHVAVGKSIDKAVTLLQWTFNHFQNAEIVILHAYQPSLTIPTLLGKLPASQASPAVVSAFRCVEREQTMKLLDKYLTVKASVIVTEVDQVQKGIVDLVVKHNIQKLVIGAVPENCMKVKRNSGKANYTAKNAPPFCEVWFLYKGKVIWTREASETPCSLSLSAQPEIATAESLRCRSFQYGKNELFDSECLQPNSARSATGFGISETGATFSSKASSCSSHCSSQNSSRAHLDTYLEAMEEKINNQLIETKREAEAVADEASAELLKCERLEVEAMEAIRKVNLFDSAHVREVKLRKEAEDALRATVEEQQKLLSESEEIASELQMTMRNIALLDSRAQEANRRRDEAADELSLIQESISTLWQERQQIRRQKMESLRWLERWRSRGQVGAAHCNGVIGFPEELPELAEFSSSDLQNATCNFSNSFKIVQGGFGCIYKGEMLGRTVTIKRFHQHNMQGPMEFRQEVQVLGSLQHPHLITLLGVCPEAWSIVYEYLPNGTLQDYLFRKSNNSPLTWNTRARMIAEIASALCFLHSFKPETIIHGDLKPETVLLDSSLSCKICGFGFCSLVSEESLLRPSFRLSTEPKGAFTYTDPEFHRTGILTTKSDIYSFGLIILQLLTGNTPVGLAALVRNAASCGKLSSILDSSAGEWPSPVASRLVELGLQFCQQNRRDRPDLTPTLVRELEQMHASEERPVPSFFLCPILQEIMHDPQVAADGFTYEGDAIREWLENGHDTSPMTNLKLNHLFLTPNHALRLAIQDWLCKS
Length805
PositionTail
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.07
Grand average of hydropathy-0.261
Instability index50.86
Isoelectric point6.18
Molecular weight90055.85
Publications
PubMed=26460024

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04854
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.88|      29|      62|     292|     320|       1
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  276-  312 (38.23/28.43)	EAMEEKIN..........................nqlietkrEAEAVADEASAELLKCERLEV
  313-  375 (27.65/18.34)	EAMEAIRKvnlfdsahvrevklrkeaedalratveeqqkllsESEEIASELQMTMRNIALLDS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.52|      29|     129|     444|     474|       2
---------------------------------------------------------------------------
  444-  474 (49.53/43.05)	PElaEFSSSDLQNATCNFSNSFKIVQGGFG.C
  576-  605 (49.99/36.50)	PE..TIIHGDLKPETVLLDSSLSCKICGFGfC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.89|      25|     134|     409|     433|       4
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  409-  433 (47.09/33.09)	RRQKMESLRWLERWRSRGQVGAAHC
  545-  569 (43.80/30.24)	RKSNNSPLTWNTRARMIAEIASALC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.74|      41|     436|      45|      87|       6
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   45-   87 (67.46/55.78)	GKSIDKAVTLLQWTFNHFQN.....AEIVILHAYQ.PSLTipTLLGKLP
  478-  524 (64.28/45.63)	GEMLGRTVTIKRFHQHNMQGpmefrQEVQVLGSLQhPHLI..TLLGVCP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04854 with Med32 domain of Kingdom Viridiplantae
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