<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04841

Description Uncharacterized protein
SequenceMLPLPMAALVSLSITFKLDKSLEYMHAITGAALENCASGCPWPSMPIIGSLWAQKVRRWHNFIVVSGSRSVFRQNNESVAQLLRSCFTSFLGTLSVSTSKLTSECGVNGLLGSTITAPGAYPYVSPGFLFLRSCRNIHNVQYVNDIIVGLVTEYSNELAGRRSDAGSRHIKSNESSLSLAAQSAKEVATLGASLLCAAGGMLLVQELYKETIPTWLLSSRDVKKNNDSVASYILEGYAMAYLLILSGSIIWGVGTKLPPGTFSRRSRTIEVHLDFLAEVMEKKISVSCNPITWKTYVCCFVGFMVSLAPVWIQEVRVDTLKKLALGLSRWNEHEIALSLLHRGGLAAMGALAELVTVIESERMLPSSLSNLY
Length372
PositionTail
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.08
Grand average of hydropathy0.257
Instability index53.21
Isoelectric point8.80
Molecular weight40575.72
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04841
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     237.41|      58|     149|      40|      97|       1
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   40-   66 (35.50/15.62)	.................................................CPWPSMPIIGSLWAQKVR............RWHNFIVVS
   67-   97 (37.79/17.04)	GSR.........SVFRQNNESVAQ.LLRSCFTSFLGTLSVS...............................................
  166-  218 (54.55/27.42)	GSRhiksnesslSLAAQSAKEVAT.LGASLL..................CAAGGMLLVQELYKETIP............TW....LLS
  219-  279 (59.61/30.55)	.SR.........DV.KKNNDSVASyILEGYAMAYLLILSGSiiwgvgtkLP....PGTFSRRSRTIE............VHLDFLAEV
  280-  332 (49.96/24.58)	MEK.........KISVSCNPITWK.TYVCCFVGF....................MVSLAPVWIQEVRvdtlkklalglsRWNE.....
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04841 with Med33 domain of Kingdom Viridiplantae
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