<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04839

Description Uncharacterized protein
SequenceMTAATRQRAMHELIFSIKSSTCKGKYRERKGQLEHNRHRKSVILYQSSNSPVIAKLLFEPANRKKPKEPNRRQATMSQICIETLLHFETHSIFLSWRRRGILRGFLTLLEMPAQCHFQHNVNLKGGKPILAWVDYDSELSVISVALSPNSSKPNTPILSFNVDLAPVFHDTMYVGFSASTGLLAISHYILGWSFKINGPAPPLNLSSLPMLPQPKKKQTSLIVGVSVSVAVIVLLAIAIGIYFYRKMRNADVIEAWELEIGPHRYFYQASPISPISQISPISQTEASPISQVSAALNSAGVSLPSVDLAHRLVSYICFDNHVPLAWKLLEKAMAVRILPPLLALSLLSTRVLSHRHLHPAAYALYIDLLNRHAFSLSSRNGSMKDVLKLGISTTLEGEKRKLGFRIRKEKGI
Length412
PositionTail
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.08
Grand average of hydropathy-0.003
Instability index47.22
Isoelectric point10.03
Molecular weight46023.27
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
carbohydrate binding	GO:0030246	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04839
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.59|      16|      16|     323|     338|       1
---------------------------------------------------------------------------
  308-  323 (28.91/22.33)	LAHRLVSYICFDNHVP
  324-  339 (26.67/20.00)	LAWKLLEKAMAVRILP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.04|      10|      20|     235|     244|       3
---------------------------------------------------------------------------
  235-  244 (18.79/12.37)	LAIAIGIYFY
  258-  267 (21.24/14.93)	LEIGPHRYFY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04839 with Med33 domain of Kingdom Viridiplantae
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