<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04836

Description Uncharacterized protein
SequenceMNKESLDYWRNYFGAANSDIFGIIDHAIMVAASDCPEEFRMRRDGIAERLFSCRLSRCLGCERVELSVPVDDDGGGCKNGFERAGAEFESEAGASKESKVNSASVDDPGVMNTNRASNYSYGEAEALTDEIEEESQYVEEVFRIKDVLLNCEEESDSVLFDSLRRLQLMELTVDLLKATEIGKAVNPLRKHGSSDICLLARTLIEAWKEMVDDWVKATTAIAGSEGTPDSVNPSVIDDEEGLPSPPMDEGALFAPPTGSMELSQFFDGMDDDGNPRHSGEFIKNRDHGRSPSLRRKPQASNEANIIAKDGKGQQAKKNEVAVRPNKPVISDSGPGRPPKSTMQKKGSIEPKVQQNTVKNTIPKNPHVRQLDKPRCSDDASVQVKLEASKRKLQERYQQVENAKRQRTVQVMELHDLPKQGIGHRNPHLKPGNHKRQWGNGRR
Length442
PositionUnknown
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.05
Grand average of hydropathy-0.799
Instability index44.03
Isoelectric point5.67
Molecular weight49127.40
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04836
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.60|      24|     239|     164|     189|       1
---------------------------------------------------------------------------
  164-  189 (32.07/27.90)	RRLQLMELTvDLLKAtEIGKAVNPLR
  406-  429 (45.53/29.02)	RTVQVMELH.DLPKQ.GIGHRNPHLK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     134.29|      40|      44|     252|     291|       3
---------------------------------------------------------------------------
  252-  291 (74.40/41.28)	LFAPPTGSMELSQFF.DGMDDDGNP.....RHSGEFIKNRDHGRSP
  293-  338 (59.89/31.90)	LRRKPQASNEANIIAkDGKGQQAKKnevavRPNKPVISDSGPGRPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.54|      31|     258|     107|     143|       4
---------------------------------------------------------------------------
   72-  105 (47.50/26.78)	DDGGGCKNgfeRAGAEFESEAGA.SKESKVNSASV
  107-  138 (50.04/46.20)	DPGVMNTN...RASNYSYGEAEAlTDEIEEESQYV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04836 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IAGSEGTPDSVNPSVIDDEEGLPSPPMDEGALFAPPTGSMELSQFFDGMDDDGNPRHSGEFIKNRDHGRSPSLRRKPQASNEANIIAKDGKGQQAKKNEVAVRPNKPVISDSGPGRPPKSTMQKKGSIEPKVQQNTVKNTIPKNPHVRQLDKPRCSDDASVQVKLEASKRKLQERYQQVENAKRQRTVQVMELHDLPKQGIGHRNPHLKPGNHKRQWGNGRR
221
442










Molecular Recognition Features






MoRF SequenceStartStop




1) HRNPHLKPGNHKRQWGN
423
439