<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04834

Description Uncharacterized protein
SequenceMAAKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAMNQVAMNPQNTVFDAKRLIGRRFSDSSVQNDMKLWPFKVVAGPGDKPMIVVSYKGEEKKFSAEEISSMVLIKMREVAEAFLGHSVKNAVITVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFKRKHKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEEMNMDLFRKCMEPVEKCLRDAKIDKSHVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVDAKNSLENYAYNMRNTIKDEKIGGKLAADDKQKIEKAVEDAIQWLEGNQLAEVDELEDKQKELEGICNPIIAKMYQGGAGGDVPMADDMPGGGSGSGSGAGPKIEEVD
Length649
PositionUnknown
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.06
Grand average of hydropathy-0.394
Instability index32.86
Isoelectric point5.26
Molecular weight71054.85
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
cell wall	GO:0005618	IEA:EnsemblPlants
plasma membrane	GO:0005886	IEA:EnsemblPlants

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process
response to heat	GO:0009408	IEA:EnsemblPlants
response to virus	GO:0009615	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04834
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      91.29|      22|      25|      30|      54|       1
---------------------------------------------------------------------------
   12-   28 (20.84/ 8.81)	.DLG....TTYSCVGVWQNDRV..
   33-   54 (40.19/29.63)	NDQGNR..TTPSYVAFTDTERLIG
   55-   77 (30.26/13.07)	DAAMNQvaMNPQNTVF.DAKRLIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.93|      20|      27|     529|     553|       3
---------------------------------------------------------------------------
  529-  548 (32.17/23.73)	RYKAEDEEVKKKV..DAKNSLE
  555-  576 (26.76/ 8.86)	RNTIKDEKIGGKLaaDDKQKIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.90|      20|      41|     336|     355|       4
---------------------------------------------------------------------------
  336-  355 (34.05/21.32)	VHEVVLVGGSTRIP.KVQQLL
  380-  397 (26.99/15.46)	VQAAILSGEGDE...KVQDLL
  414-  433 (26.86/15.36)	VM.TVLIPRNTTIPtKKEQIF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.25|      18|      19|     245|     263|       6
---------------------------------------------------------------------------
  245-  263 (26.99/23.62)	HFVTEFKRkHKKDISGNAR
  267-  284 (29.25/20.18)	RLRTACER.AKRTLSSTAQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04834 with Med37 domain of Kingdom Viridiplantae
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