<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04821

Description Uncharacterized protein
SequenceMARSFSRGSLLPLAIVSLGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFQDKEVQRDMKLVPYKIVNKDGKPYIEVKIKDGENKVFSPEEISAMILTKMKETAEAFLGKKINDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRSLSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQISDKDKLADKLESDEKEKIESAVKEALEWLDDNQSVEKEEYEEKLKEVEAVCNPIISAVYQRSGGAPGGGASGEDDDDSHDEL
Length666
PositionUnknown
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.06
Grand average of hydropathy-0.453
Instability index32.53
Isoelectric point5.11
Molecular weight73390.24
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04821
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     541.96|     169|     193|     131|     322|       1
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   50-  121 (67.62/31.01)	.........................................................................................................................................GVYK....NG.....HVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTV.FDVKRLIGRKFQDK.EVQRDMKLV
  131-  322 (235.14/203.64)	KPYIEVKIKDGENKVFSpeeiSAMILTKmKETAEAFLGKKINDAVVTVPA.............YFNDaqRQATKdaGViaglnvariiNePTaAAIAYG.......LDKKGGE..KNILVFDLggGTFDVSILTIDNGVFEVLATNG.....DTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREA.ERAKRSLSSQHQVRVEIESLFDGV
  326-  516 (239.20/151.49)	EPLTRARFEELNNDLFR....KTMGPVK.KAMEDAGLQKNQIDEIVLVGGstripkvqqllkdYFDG..KEPNK..GV..........N.PD.EAVAYGaavqgsiLSGEGGEetKDILLLDV..APLTLGIETVGGVMTKLIPRNTviptkKSQVFTTYQDQQ.TTVSIQVFEGE..RSLTKDCRLLGKFDLSGiPPAPRG.TPQIEVTFEVDA..NGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.77|      24|      26|     538|     561|       2
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  538-  561 (36.32/24.51)	KGRL.SQEEIERMVREAE.EFAEEDK
  564-  589 (26.88/16.21)	KERIdARNSLETYVYNMKnQISDKDK
  594-  617 (35.58/23.86)	LESD.EKEKIESAVKEAL.EWLDDNQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04821 with Med37 domain of Kingdom Viridiplantae
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