<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04817

Description Uncharacterized protein
SequenceMAVVSPMPATAPQINRTSKLRDVGVPGIMTSRSEIVSEPSPSMVDDTLYVAVAKDVKDSKLNLIWAIQNSGGRRICILHVHVPSPTIPMMGAKFPASALREQEVQDYHERERQKVPKTMDPYLYICQRMGVRAGKVLIEMDCVEKGIVELIHQYGIQRLVMGAASDKNYSRRMISLKSKKAIYVSEQAPASCHMQFVCNGYLIHTRDCRLDRGNVEVGSPVLQIANSEVGHSPNMGSPSSVEGQNRWRKPINTGQELFRRVRTINEGYLTPQRKFSKEASCDEFDEQSRGSPSVFSMCFESCLGEAQLIPDLINNGSENVLGLSLNDFSLDNKDLHSPSPSVLDEGMDDALYGQLEQAMAEAWNARKDAHQETVRRVKAEKEAKDAIRKAKATENLYQEELKLRKEQEEEVQKANEEVDNMKSQINKVNEELQLALDQKLSLENQIASTELIVKELEQKNISADELSQKYKDELDELQMQLDNALGEAEELKRKQGESSSMHGLQPFSEFSFSEIKEATRNFNPSLKIGQGGYGSIFKGILRHTEVAIKMLSPDSAQGPMEFQQEVEILSRLRHPNLVTLIGSCPESWTLVYEYLPNGSLEDRLNCKDNTPPLSWQTRIRIAAELCSALIFLQSSKPHSIAHGDLKPGNILLDANLVTKLSDFGICRILSCQEGSSSSTTEFWRTVPKGTFVYVDPEFLISGELTPKSDVYSFGVILLRLITGKPALGITKEVQYALHSRKLKSILDPLAGDWPVMLAEELVRLALRCCEMSRKNRPDLHPDVWRILEPMRASCGPTQLGSQGKCQPPPYFICPISLEVMQDPQVAADGFTYEAAAIREWLQSGRHTSPRTKSKLAHHNLIPNHSLRHAIQDWLQTH
Length877
PositionTail
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.06
Grand average of hydropathy-0.438
Instability index48.26
Isoelectric point6.06
Molecular weight98331.07
Publications
PubMed=26460024

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04817
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     126.81|      36|      67|     387|     422|       1
---------------------------------------------------------------------------
  387-  422 (57.86/40.05)	IRKAKATENLYQEELKLRKEQE..EEVQKANEEVDNMK
  425-  450 (27.06/14.75)	INKV.......NEELQLALDQKlsLENQIASTE.....
  452-  478 (41.89/26.93)	IVKELEQKNISADELS...........QKYKDELDELQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.20|      25|      51|     280|     305|       3
---------------------------------------------------------------------------
  280-  305 (42.91/31.45)	SCDEFDEQSrGSPSVFSMCFESCL.GE
  329-  354 (40.29/24.62)	SLDNKDLHS.PSPSVLDEGMDDALyGQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      91.47|      25|      50|     504|     529|       4
---------------------------------------------------------------------------
  485-  505 (17.77/ 6.93)	......LGEAEELKRKQGESS..SMhGLQ
  506-  531 (37.60/29.26)	PFsEFSFSEIKEATRNFNPSL..KI.GQG
  559-  584 (36.10/22.68)	PM.EFQ.QEVEILSRLRHPNLvtLI.GSC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.21|      20|     433|     239|     272|       5
---------------------------------------------------------------------------
  247-  266 (36.39/44.00)	WRKPINTGQELFRRVRTINE
  363-  382 (34.82/10.17)	WNARKDAHQETVRRVKAEKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.26|      24|     191|      22|      45|       8
---------------------------------------------------------------------------
   22-   45 (43.72/26.20)	DVGVPGIMTSRSEIVSEP...SPSMVD
  216-  242 (37.54/21.49)	EVGSPVLQIANSEVGHSPnmgSPSSVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.80|      37|      73|     716|     752|       9
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  716-  752 (61.92/40.16)	IL..LRLITGKPALGITKEVQ...YALHSRKLKSILDP.LAGD
  786-  828 (54.88/34.77)	ILepMRASCGPTQLGSQGKCQpppYFICPISLEVMQDPqVAAD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04817 with Med32 domain of Kingdom Viridiplantae
Unable to open file!