<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04814

Description Uncharacterized protein
SequenceMDSNNWRPNQGNNPTMDTNDWRAQLPPESRQKIVNKIMDTLKKHIPFSGPNGLQELRLIAQRFEEKIFTAATSQPDYLRKISMKMLTMETKSQNTLTNSQVGPSNKPTDQGLVLQPQVHNLGQQHSVPLSSQMQSHQQLLSQNVQNNVASQPNLPPVSSLGQTPSQNIVQNSNIQNIPGPNSVGSTISQNSNLQSMFPGSQRTMPGRQQVGPSQQQLQSQSPQQFLYQQQYLKQKLQQQSQMQQQQQQSLMQPSQLQSSQQSTSIQQSMQSMPQQHSQVMRHQQQQTSMVHQQQTPATQQTILPAQQQLMGPQSNTANMQHSQMLGQQNNVGDKQQPQRMLSQQSNLTSLQQQRQQQLINQQNNPANVHQQQLGNNGPGLQQQHLLGPDSGNADMHTSLHSAHMLQQPKAPMQQQSQQNSLNLLLPHSQQSQPLGSQQQLMPQIHTQSTQLQQQLGLQQQQPNPSQRDMQQRIQTSGSLLQQNVHDQQKQLYQSQRNHSETSATSLDSTTQSAQPSGNDWQEEVYQKIQAMKESYLPDMNEVYQKVANKLQQHDSLPQQSKSDQIDKLRAYKMMLERMMALVQIPKMSITPHFKEKLGSYEKQIISLINQSRPRKGMSSVQVGQIPQTHMSSMQQPQSQVTQLQSHENQMNSQLKSTNLQGSVPTMQQNNIATSQHNPLSGVSAGQQNMMNSMQPGANLDSGQGNSVTSFQHVPMNSIQQTPVSTPQLQTNINSLQSQGGANVSQPNSLQSGSSALQHQLKHQEQQMLQTQQFKQFQHRQMVQRQLFQQQQQQQLHHPAKPQLSAQLQTHQMSQLHQMNDINDLKMRQGIGVKPGVFQQHLTSGQHSAYSHQQLKQGNAFPVSSPQHLQAPSPQIQQHSSPQVEQQNHLPSKTKVATPLQSSNSPFVGPTPSPPLAPSPMPGESEKSVPCVSSISNAANIGHHQTGGVVAPPQSLAIGTPGISASPLLAEFSGQDGAHGNALAATSGKSTVTEQPLERLINVVKSMSSKALSAAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGTNGVKRMKRYTSAIPLNGVLSAGSMNDSIKQLTASEASDLESTATSSVKKRKIEVNHALLEEIRDINHQLIDTVVDISNVDPTPAVEGAEGILVKCSFIAVALSPSLKSQYASAQMSPIQPLRLLVPANYPNCSPILLDKFPVESSKENEDLSAKAKAKFSISLRSLPQPMSLGDIARTWDVCARSVISEHAQQSGGGSFSSKYGTWENCLTTN
Length1277
PositionTail
OrganismPhaseolus angularis (Azuki bean) (Vigna angularis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Vigna.
Aromaticity0.03
Grand average of hydropathy-0.783
Instability index68.20
Isoelectric point9.37
Molecular weight140606.63
Publications
PubMed=26460024

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04814
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            11|     807.97|      74|      75|     252|     325|       2
---------------------------------------------------------------------------
   50-  129 (55.45/ 8.51)	...PNGLQElrliAQR.fEEKI..F....................TA.AT.SQPD.YLRK.......IsmkmltMETKS.QNT.LTNSQ..V....GP.SNK....PTD.QGLvLQP.QVHNLG...QQ...HS.VP..L
  131-  193 (62.40/10.72)	....SQMQS....HQQllSQNV..Q....................NN.VA.SQPN..........................LPPVSSLG..Q....TP.S.QNIVQNSNiQNI.PGP.NSVGST...IS...QN.SN..L
  194-  250 (74.04/14.42)	Q...SMFPG....SQR...................................TMPG.RQ.Q.......V......GPSQQ........QL..Q....SQ.SPQQ.FLYQQ.QYL.KQK.LQQQSQ...MQ...QQ.QQqsL
  252-  325 (130.96/32.50)	Q..PSQLQS....SQQ..STSI..Q....................QS.MQ.SMPQ.QHSQ.......V......MRHQQ.QQTSMVHQQ..Q....TP.ATQQTILPAQ.QQL.MGP.QSNTAN...MQ...HS.QM..L
  327-  405 (73.34/14.19)	Q..QNNVGD....KQQ..PQRMlsQ....................QSnLT.SLQQ.QRQQ.......Q......LINQQ.NNPANVHQQ..QlgnnGP.GLQ......Q.QHL.LGP.DSGNAD...MHtslHSaHM..L
  406-  463 (68.08/12.52)	Q..QPKAPM....QQQ..SQ....Q....................NS.LNlLLPHsQQSQ.......P......LGSQQ.QLMPQIHTQ..S....TQ.LQQQ..LGLQ.QQ......QPN...................
  464-  531 (67.11/12.21)	...PSQRDM....QQR.....I..Q....................TS..G.SLLQ.QNV.................HDQ.QKQLYQSQR..N....HS.ETSATSLDST.TQS.AQP.SGNDWQeevYQ...KI.QA..M
  552-  639 (64.49/11.38)	Q..HDSL......PQQ..SKSD..QidklraykmmlermmalvqiPK.MS.ITPH.FKEK.......L......GSYEK.QIISLINQS..R....PR.KGMSSVQVGQ.I.....P.QTHMSS...MQ...QP.QS..Q
  644-  705 (65.92/11.83)	QshENQMNS....QLK..STNL..Q....................GS.VP.TM...........................QQNNIATSQ..H....NP.LS..GVSAGQ.QNM.MNS.MQPGAN...LD...SG.QG..N
  745-  815 (75.76/14.96)	Q..PNSLQS....G....SSAL..Q....................HQ.LK.HQEQ.QMLQ.......T......QQFKQfQHRQMVQRQlfQ....QQ.QQQQLHHPAK.PQL........SAQ...LQ...TH.QMsqL
  833-  907 (70.42/13.26)	K..PGVFQ......QH..LTSG..Q....................HS.AY.SH.Q.QLKQgnafpvsS......PQHLQ.APSPQIQQH..S....SPqVEQQNHLPSK.TKV.ATPlQSSNSP............F..V
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.48|      18|     110|     958|     975|       3
---------------------------------------------------------------------------
  908-  924 (17.74/ 6.14)	...GPTPSPPLAPspMPGES
  927-  944 (26.80/13.92)	SVPCVSSISNAAN..IGHHQ
  958-  975 (29.94/16.62)	GTPGISASPLLAE..FSGQD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.98|      22|      47|    1166|    1187|       7
---------------------------------------------------------------------------
 1166- 1187 (37.89/19.70)	LSPSLKSQYASAQMSPIQPLRL
 1215- 1236 (36.09/18.38)	LSAKAKAKFSISLRSLPQPMSL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04814 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KGMSSVQVGQIPQTHMSSMQQPQSQVTQLQSHENQMNSQLKSTNLQGSVPTMQQNNIATSQHNPLSGVSAGQQNMMNSMQPGANLDSGQGNSVTSFQHVPMNSIQQTPVSTPQLQTNINSLQSQGGANVSQPNSLQSGSSALQHQLKHQEQQMLQTQQFKQ
2) MDSNNWRPNQGNNPTMDTNDWRAQLPPESRQKIVNKIMDTL
3) QQQSQMQQQQQQSLMQPSQLQSSQQSTSIQQSMQSMPQQHSQVMRHQQQQTSMVHQQQTPATQQTILPAQQQLMGPQSNTANMQHSQMLGQQNNVGDKQQPQRMLSQQSNLTSLQQQRQQQLINQQNNPANVHQQQLGNNGPGLQQQHLLGPDSGNADMHTSLHSAHMLQQPKAPMQQQSQQNSLNLLLPHSQQSQPLGSQQQLMPQIHTQSTQLQQQLGLQQQQPNPSQRDMQQRIQTSGSLLQQNVHDQQKQLYQSQRNHSETSATSLDSTTQSAQPSGNDWQEEV
4) RKISMKMLTMETKSQNTLTNSQVGPSNKPTDQGLVLQPQVHNLGQQHSVPLSSQMQSHQQLLSQNVQNNVASQPNLPPVSSLGQTPSQNIVQNSNIQNIPGPNSVGSTISQNSNLQSMFPGSQRTMPGRQQVGPSQQQLQSQSP
5) RQMVQRQLFQQQQQQQLHHPAKPQLSAQLQTHQMSQLHQMNDINDLKMRQGIGVKPGVFQQHLTSGQHSAYSHQQLKQGNAFPVSSPQHLQAPSPQIQQHSSPQVEQQNHLPSKTKVATPLQSSNSPFVGPTPSPPLAPSPMPGESEKSVPCVSSISNA
615
1
237
79
779
775
41
524
222
937










Molecular Recognition Features






MoRF SequenceStartStop




NANANA