<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04767

Description Uncharacterized protein
SequenceMILTKQLDLPCYEYPPYVSTSTPRTNLAKELEKYNRPPTEFQTYQSKLYPGKPIAPKPKDSSIDRPNILSKRPNYKPQYRYDPQVPVALNLSTKAAAAAAAAAAASTTASTTNTVNCVTNGSGLDLTMKPMPGASVAGVPASTSVNVTAGLTTTATTTIASITTTTSLPGGNMPLTSRSNTSNGSTNSSSPGNCAIAIAAATAAAAAAAASGGGGGGGGGSGGGGGAAGGVGGGGGAGTGLMETANVNVMQQQQQQQQQQQQQQQQQLQQQQHPHQNHHHQQQQQQQQQQQQHQQQPPPPPPPPPHQHQQQQQSPHHQQQQQHQQQQQPQHTVHQVSQPDTGTLSSHQTHHHQQQQPDDLMVSSSPSALSVVTSIPASLSSPPLNTAISSSSSSSKGDYNGLPVSPVNVPALEKTVCVNGIASPKSPSSLSKASPISSTPPRTSREGRELIHCPTPGCDGSGHVSGNYASHRSLSGCPLADRATVLASHVEQKCPTPGCDGSGHITGNYSSHRSLSGCPRAAKLKKILGKDGERKDDEPLR
Length541
PositionKinase
OrganismOctopus bimaculoides (California two-spotted octopus)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Mollusca> Cephalopoda> Coleoidea> Octopodiformes> Octopoda> Incirrata> Octopodidae> Octopus.
Aromaticity0.02
Grand average of hydropathy-0.757
Instability index62.12
Isoelectric point9.08
Molecular weight56274.32
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
DNA binding	GO:0003677	IEA:UniProtKB-KW
zinc ion binding	GO:0008270	IEA:InterPro

GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04767
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     112.03|      19|      27|     256|     282|       1
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  251-  267 (37.55/ 8.01)	QQ.......QQQQQQQQQQQQQQQ
  271-  294 (39.82/21.33)	QQhphqnHHHQQQQQQQQQQQQHQ
  316-  332 (34.66/ 7.62)	.......HHQQQQQHQQQQQPQHT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      85.89|      15|      18|     457|     471|       2
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  457-  471 (34.30/21.01)	GCD..GSGHVSGNYASH
  476-  489 (17.98/ 7.47)	GCPlaDRATV...LASH
  498-  512 (33.61/20.44)	GCD..GSGHITGNYSSH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.11|      18|      40|     298|     315|       3
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  298-  315 (40.82/14.63)	PPPPPPPPHQ.HQQQQQSP
  339-  357 (32.29/10.14)	PDTGTLSSHQtHHHQQQQP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      72.85|      14|      17|     209|     222|       4
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  181-  194 (21.11/ 7.28)	TSNGSTNSSSPGNC
  209-  222 (26.83/11.34)	AASGGGGGGGGGSG
  227-  240 (24.91/ 9.98)	AAGGVGGGGGAGTG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.81|      10|     104|      95|     104|       5
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   95-  104 (17.28/10.77)	AAAAAAAAAA
  199-  208 (17.53/11.02)	AAATAAAAAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.08|      23|      26|       3|      28|       7
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    5-   27 (43.53/22.45)	KQL...DLPCYEYPPYVSTSTPRTNL
   29-   54 (35.55/14.00)	KELekyNRPPTEFQTYQSKLYPGKPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     106.19|      23|      41|     105|     135|       8
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  105-  127 (41.62/16.93)	ASTTASTTNTVNCVTNGSGLDLT
  137-  154 (29.91/22.53)	AGVPAST..SVN.VT..AGLTTT
  156-  176 (34.66/11.95)	TTTIASITTT.TSLPGGN.MPLT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.40|      19|      26|     363|     388|       9
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  363-  385 (28.49/18.97)	SSSPSALSVVTSIPASlsspPLN
  390-  408 (32.90/11.66)	SSSSSSKGDYNGLPVS....PVN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04767 with Med12 domain of Kingdom Metazoa
Unable to open file!