<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04755

Description Uncharacterized protein
SequenceMRRDTHWKCLILTLLIYACLAAITWCRLTVVTKKVTSLYDSLLTKISHASPCDDGYIYIPVAFVIMLYLVYLVECWHSHTRIQLQYKVDGNMVYERVRNMREALPIIWWKAVCYHYVRRTRQVTRYRNGDAFTTTQVYYERVNSHAAGSAFNFSNCGVKDVSRVLVGLDLYPATKIRFTKGFSFATFEAECEFEDQRAQFFQDNERRDDYMESQEGMDLLNVHFKEYMIAFADPENLPWYVSHIIFWIASFFLLSWPLRVIIEYKTAYVHLHVHKLFGTNYLDSAAAGGTGGQLSRVSTMGSSEMEMTIRNNYAIVPSYSEALLIQSPIDGPCQTTYLLRRPIPDANGNLTVPMRSFTFSSLSNVQGSENSCYIRGSCSNGYLSTSARDARPSNCITAGRGSSLMSSGHITSIDDAVDADEEESATENEDTDVSPQATLRGYASIKQQRRRKRKRSRNSGIASTVVTTAASTSGVQGQDQVYPNRNNSASIDRGVLRQSSSVTSMATYSCTPHTSNSHQCVIVNSPAVASFEMVNMSNRSTPSTSRQSSIITVNVPGNPKATSLPAAIMSGSMIDTTTTTTTTTTSSTSASSFFQQHNHQQQQQQQQQQQQQQQKQLQLKEQQEPDQPLRLSADSAATQAAATAVDLLLQQQHKPNAQDSRKLQNTGIVTTRLTSLSGGENTSTTQKQQRRQQQQQQQQQQQQQQQQQHLWSLQRRETNKRNDSLSKNKSTDGNHDNSYTSMSRSNQRHLLTSHASRDSQDNYCRNIGSSRTTGNHGSSCYNKDNKHGSSGSSGRSSSNVNRTDSLTSPPTSAAPSAASKRTRSQSTSRLERQSRVESHDEDHPDPPPCYEDALWMQRVIADSRSNSEGFGESLNPSHLAFARGGRPYRTIRLMETSL
Length898
PositionTail
OrganismOctopus bimaculoides (California two-spotted octopus)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Mollusca> Cephalopoda> Coleoidea> Octopodiformes> Octopoda> Incirrata> Octopodidae> Octopus.
Aromaticity0.07
Grand average of hydropathy-0.672
Instability index61.40
Isoelectric point9.00
Molecular weight100600.51
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04755
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     310.26|      81|      89|     540|     626|       1
---------------------------------------------------------------------------
  463-  515 (51.63/18.89)	...STVVTTAASTSGVQGQDQV..YPNRNNSAS.IDRGVlrqsssVTSM.ATYSCTPHTS..................................
  540-  621 (136.80/72.03)	STPSTSRQSSIITVNVPGNPKATsLPAAIMSGSMIDTTT......TTTT.TTTSSTSASSFFQ.QHNHQQQQQQQQQQQQQQQKQ....LQLKE
  632-  717 (121.83/53.01)	SADSAATQAAATAVDLLLQQQHK..PNAQDSRKLQNTGI......VTTRlTSLSGGENTSTTQkQQRRQQQQQQQQQQQQQQQQQhlwsLQRRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     134.52|      36|      37|     737|     772|       2
---------------------------------------------------------------------------
  737-  761 (32.59/13.57)	.................NSYTSMSRSNQRHLLTSHASRDSQD
  762-  799 (55.46/28.45)	NYCRNIGSSRT....tgNHGSSCYNKDNKHGSSGSSGRSSSN
  801-  840 (46.47/22.60)	NRTDSLTSPPTsaapsaASKRTRSQSTSR..LERQSRVESHD
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.19|      10|      44|     329|     338|       3
---------------------------------------------------------------------------
  329-  338 (20.97/13.79)	IDGPCQTTYL
  374-  383 (20.22/13.00)	IRGSCSNGYL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.81|      33|      50|     167|     201|       5
---------------------------------------------------------------------------
  167-  201 (54.27/47.58)	GLDL....YPATKIRFTKGFSFATFEAECEFedQRAQFF
  216-  252 (57.53/43.02)	GMDLlnvhFKEYMIAFADPENLPWYVSHIIF..WIASFF
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.74|      13|      37|      75|      87|       6
---------------------------------------------------------------------------
   75-   87 (27.39/17.29)	CWH..SHTRIQLQYK
  113-  127 (21.35/11.81)	CYHyvRRTRQVTRYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.58|      42|     591|     256|     303|       8
---------------------------------------------------------------------------
  256-  303 (67.75/59.06)	WPLRVIIEYKTAyvhlhvHKLFGTNYLDSAAAGGTGGQLSR.VSTMGSS
  855-  897 (71.82/47.92)	WMQRVIADSRSN......SEGFGESLNPSHLAFARGGRPYRtIRLMETS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04755 with Med15 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FEMVNMSNRSTPSTSRQSSIITVNVPGNPKATSLPAAIMSGSMIDTTTTTTTTTTSSTSASSFFQQHNHQQQQQQQQQQQQQQQKQLQLKEQQEPDQPLRLSADSAATQAAATAVDLLLQQQHKPNAQDSRKLQNTGIVTTRLTSLSGGENTSTTQKQQRRQQQQQQQQQQQQQQQQQHLWSLQRRETNKRNDSLSKNKSTDGNHDNSYTSMSRSNQRHLLTSHASRDSQDNYCRNIGSSRTTGNHGSSCYNKDNKHGSSGSSGRSSSNVNRTDSLTSPPTSAAPSAASKRTRSQSTSRLERQSRVESHDEDHPDPPPCYEDALWMQR
2) IADSRSNSEGFGESLNPSHLAFARGGRPYRTIRLMETS
3) SGHITSIDDAVDADEEESATENEDTDVSPQATLRGYASIKQQRRRKRKRSRNSGIASTVVTTAASTSGVQGQDQVYPNRNNSASIDRGVLRQ
531
860
407
858
897
498










Molecular Recognition Features






MoRF SequenceStartStop




NANANA