<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04715
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDLLYTVNRKVALKPFVNQESLYEGQSLCSLSSRNITAFTTTTELDDNSGKTWGSHVYVCDLNMPWHTHKVLSNKNTITALEWDLPGDKLVVADSTGNVQLWMFKDHVLNDWVLIGSTCFVGEHILGAAWFHNGKKTGLVTEKKDSIHYSEKFNHLPFAPSVRQFGGRAAEGVLVVSTTGMVGAVMITKDFQNPVCSSTESLGSTRHRITAVDLCYGKNGHILVAVSSGNICLPIRCYRVLVRKNDDKCTITSQALPSFFLQDGAPKDSTYTSVTHLKFVVREDADSLVIAVNSDSGGIVEVWELREKSQPVHKLFQPKTLEPFKTVVVWQHQSQYRCQSPIAAIATTKLSIVTTLPPPSYVVVALADSSVHCLSRDCLKEIAFSSLNMAWRPDEPNNKYFKSSVSITNIDLSWLGCVLLACDTRGNLYLYKLLPDGGPSLTLSYACTLLEYCLVTGLDWLDILLCLRSSMIEPLCERLDVSFNRQLQPIQQYHYIQFLCIKTSLMLVPGQSKAADLSSLLMIHSVATAFKSLLRPSDLISHDKGPAESLATVINEAITDVDKVLLHLDPKEFTVEPSTLQSLQQLIQWVANLALNLLARLPEQRLQMKSGGYELLKDHKALNTLRELLVIIRIWGLLRPSCLPVFLRSTDNLDVLALLFRLLSKLVQPNGDGQSQQVDDGLIEITDESRRNRAKKHKDLPPLVIHRRNSGNDIERFGTVKVEKDVDKIGGKKGVSELEDDKRKAERESMKEYLKLVAVTPQDDTDTKSPKGPLSPRELFFIDLIREAEKAERSRADNPKRTEEEHFFPSDFSPTEKDIGKYRKEEIRLTESPTSAEREATYFIADVENDCCLLPNQIMIPQLHQGNSITAIATPVLFYQSFPLQLEYGIEPEQLLFMPDLNSVEGCMHSGQIVDGIRHLYLGKQPLLVKQCTRCGGKAQVQNMTRTAAIRAWDQRWSRACRCGGVWRIHKTCP |
Length | 974 |
Position | Tail |
Organism | Habropoda laboriosa |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Hymenoptera> Apocrita> Aculeata> Apoidea> Apidae>
Habropoda.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.199 |
Instability index | 49.88 |
Isoelectric point | 6.95 |
Molecular weight | 109253.34 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP04715
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 75.29| 25| 32| 398| 426| 1
---------------------------------------------------------------------------
394- 422 (37.87/37.00) DEPNNKYFK.....SSVSITnidLSWlGCVLLA.C
423- 453 (37.42/23.00) DTRGNLYLYkllpdGGPSLT...LSY.ACTLLEyC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 98.91| 27| 32| 314| 340| 2
---------------------------------------------------------------------------
314- 340 (51.83/32.07) KLFQPKTLEPFKTVVVWQHQSQYRCQS
349- 375 (47.08/28.50) KLSIVTTLPPPSYVVVALADSSVHCLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 93.77| 31| 36| 774| 808| 3
---------------------------------------------------------------------------
774- 808 (44.08/44.54) LSPRElffIDlIREAEKAERSRADNPKRTEEE.HFF
812- 843 (49.69/34.58) FSPTE...KD.IGKYRKEEIRLTESPTSAEREaTYF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.65| 12| 36| 855| 869| 4
---------------------------------------------------------------------------
855- 869 (18.26/19.02) PNQIM.IPQLhqgNSI
892- 904 (18.39/ 8.97) PEQLLfMPDL...NSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 37.59| 11| 36| 464| 474| 5
---------------------------------------------------------------------------
464- 474 (20.78/11.07) LLCLRSS.MIEP
498- 509 (16.81/ 7.68) FLCIKTSlMLVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.63| 13| 27| 82| 94| 9
---------------------------------------------------------------------------
82- 94 (23.69/14.10) EWDLPGDKLVVAD
111- 123 (24.94/15.24) DWVLIGSTCFVGE
---------------------------------------------------------------------------
|