<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04618

Description Uncharacterized protein
SequenceMGVSLVARVEGVGADAFQLIADRLLRDHQAPARERWLAVIRSLRQPIPPIEDAPTVSERQKDASDARNRGRKQRTMYCLRHSGRPGELIAMIEDAEAPNRRAQDATIQRSHLSSPLDPIGVEHHKTTQDGHLAPQNPVKLMSDTILEDAQHKDGDQPPTNTNGAHPENLPIAMTAEHASTDMAVDNAIAPIKNDSDTTTPSHYRVSIVSVPDSFEQLLSSAICAPQTTLIPSAWCPRPNIIAIEGMSWGIYSSSFESEIGPGSNLGPMSSTMSTKESQPDWWIRLGTVTNKGASSGSISLPWLMLELECATSPIELDPSSEFLESVLHALIKPDRQLLVKPFRPTEQDLIEAGLTSEESNLTSSPNPPKTASLRNGYCMLMLAKQESLI
Length389
PositionHead
OrganismPuccinia striiformis f. sp. tritici PST-78
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Pucciniomycetes> Pucciniales> Pucciniaceae> Puccinia.
Aromaticity0.04
Grand average of hydropathy-0.415
Instability index62.24
Isoelectric point5.26
Molecular weight42478.45
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04618
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.89|      29|      66|      18|      50|       1
---------------------------------------------------------------------------
   18-   44 (40.78/14.93)	...QL.........IADRLLRDHQAPARERWLAVI.RS.LR
   45-   80 (36.25/18.54)	QP...ippiedaptVSERQKDASDARNRGRKQRTM.YC.LR
   84-  113 (30.87/10.72)	RPgEL.........IA..MIEDAEAPNRRAQDATIqRShLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.57|      15|      17|     252|     266|       2
---------------------------------------------------------------------------
  252-  266 (26.74/16.74)	SSSFES.EIGPG..SNLG
  269-  286 (16.83/ 7.84)	SSTMSTkESQPDwwIRLG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04618 with Med20 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ELIAMIEDAEAPNRRAQDATIQRSHLSSPLDPIGVEHHKTTQDGHLAPQNPVKLMSDTILEDAQHKDGDQPPTNTNGAHPENLPIAMTAEHASTDMAVDNAIAPIKNDSD
2) IPPIEDAPTVSERQKDASDARNRGRKQRTMYCLR
87
47
196
80










Molecular Recognition Features






MoRF SequenceStartStop




NANANA