<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04597
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MKTSFIPEPLRDDEVAQTMAALNDMIRMRLVSMECGVPAELLRDCRVDMGRVIFTVAHEFELTLTLPGGPDPNGPWHILDFRILDPNLALHEYQRQNLVHIGNSKLLAASGAGAAQVPPQPPPGAAAGSTAVVSAGPTVHFPLLEVYHFFHHFILTLRLEKMVVESYTLLNSPNAPGLDTISVKDDGRTLELAYWSNSRNGATVRVSLRETERRDVINISAHPVVQCPPEPTATPALVALPVRPTTASFTYSATSLVVQHLGRESPIVESKTLTALLAQCLDTHTARILTELATLVERGAVNDGMPGPPPPPAVPEAALVGGSSASPPHVSDGALHLPVYAVSIAVHRQSGKFHVAPLDRYNEKLQHLEAMLNEDPLFLPHTLANYATARLMDRIVTSVTFLGLVPSPRPPNALTVASSGQAANLGPRVFLRVVHKPAVPEYHLAVNVVQGVVTCWVLHWPSMTVVKEYHPSLHDLVETFDQYTSLHQIQAALAVKGVHLAWHGAGLAIDPLSFPPGAGLLLAVETLTVVPLETPPQVHVQCRLKYALPGLGATTVLAFKAKSVRTALRRCVVALGIVHLLVQSDPRDVIDVDLDAGSMRYRIGAAREMLVQVQMAAAGPVSSAGPSSGENGRAMITAGTSPSTRTDLSPSVAKVVGWTEAPYSFRVTMGADAIFDPIARAAQANLNQHGHVDLCLPSLCLAVHVWTIVASRLHAHRTQTSRAYPRFVVKSAEFATVYLTRTAALHLRYLLDETRRCLVVSSRHFPLFASLSRAVTTRVTSHAGLQAVALPNAIILPASDARAAAVEAMLDALLDQYTRTRVLLDAHAALIARFPPGRPTSASAAAAAAAVEANQPRVMQYAPPPPPRDVVVDDDAVRFIWCDVAVRVTATAVHADADAVPAAAAAAAAGAGGNGAPPSLSVDTTRQLGVHERRALARLLQFDFAHGLAAAGVTPPSAAPAAPTSDPGALMANVVDALMTLMALPVPVIRAIAQCSALVAETNPPRHVALLFLAPPKGAVPHDVQRCLPPPSRPCLLVSRAAPARSLESADGANSGAPGAPGTPGPTATSGGGGNDEDSVSLVFVLTCPPVPVGAPPPPPPIYVPVTYAWSSNVVSPWEGLPVSAAGSGKEMNPSMLLAILAGQGGMPTAATRRRTVADVVNDLKREGFAVAQQENLLVWTMRRVVARHVAELA |
Length | 1194 |
Position | Tail |
Organism | Allomyces macrogynus (strain ATCC 38327) (Allomyces javanicus var. macrogynus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Blastocladiomycota>
Blastocladiomycota incertae sedis> Blastocladiomycetes> Blastocladiales>
Blastocladiaceae> Allomyces.
|
Aromaticity | 0.05 |
Grand average of hydropathy | 0.155 |
Instability index | 40.18 |
Isoelectric point | 7.14 |
Molecular weight | 126256.89 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP04597
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 664.26| 205| 231| 131| 361| 1
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63- 295 (285.96/200.38) TLTLPGGPDPNGPWHILDFRILDPNLALHEYQRQNLVHIG..NSKLLAASGAGAAQVPPQPPP.gaaagstAVVSAGPtVHFPllevyHFFHHFIlTLRLEKMVVESYTLLN...SPNAPglDTISVKDDGRTLELAywsnSRngATVRVSLRET..ERRDVINIsAHPVVQC..PPEPTAT......PALV...ALPVRPTTASF.TYSA.....TSLVVQ..HLGRESPiveskTLTALLAQCLDTHT....ARILTELATL
299- 527 (274.17/148.42) GAVNDGMPGPPPPPAVPEAALVGGSSASPPHVSDGALHLPvyAVSIAVHRQSGKFHVAPLDRYneklqhleAMLNEDP.LFLP.....HTLANYA.TARLMDRIVTSVTFLGlvpSPRPP..NALTVASSGQAANLG....PR..VFLRVVHKPAvpEYHLAVNV.VQGVVTCwvLHWPSMTvvkeyhPSLH...DL.....VETFdQYTSlhqiqAALAVKgvHLAWHG.........AGLA..IDPLSfppgAGLLLAVETL
1013- 1088 (104.14/49.26) ........LAPPKGAVP......................................................................................................................................................HDVQRC..LPPPS.R......PCLLvsrAAPARSLESA...DGA.....NSGAPG..APGTPGP.....TATSG.GGGNDEDS....VSLVFVLTC.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 421.51| 96| 231| 856| 951| 2
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586- 663 (89.52/31.28) PRDVIdVDLDAgsMRYRIG.....AAREMLVQ.VQMAA...AG..PVSSAGPSSGENGRamitaG....TSPSTRTDLSPS.................................................vAKVVGWTEAPY
664- 754 (65.57/21.22) ........................SFRV..T..MGADAifDPI.....ARAAQANLNQH.....GhvdlCLPSLC......LAVH....VWTIVASRLH...AHRTQTSrayprfvvksaefatvyltrtaALHLRYLLDET
755- 866 (116.43/42.59) RRCLV.VSSRH..FPLFASlsrAVTTRVTSHAgLQAVAlpNAIilPASDARAAAVEAML.....D....ALLDQYTRTRVLLDAHaaliARFPPGRPTSASAAAAAAA..................veanqPRVMQYAPPPP
867- 963 (149.99/56.70) PRDVV.VDDDA..VRFIWC...DVAVRVTATA.VHADA..DAV..PAAAAAAAAGAGGN.....G....APPSLSVDTTRQLGVH....ERRALARLLQFDFAHGLAAA..................gvtpPSA...APAAP
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