Description | Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MGVPPRQPQRGPSSTLAVQRPAHHQRSLSQQYLSTSTSPIRKDAHPDLTNEPVDAAQGRHHVSTPRRGGSKLRLELSNDLGNGPASATESPQVLTPSRMMPMSDATDMDTMSPALSRASQQEPDNVPMPMPRRRPQASQLPAGTLRTSTLAPAQVKKDSRPKPYTVEVPPAAPRFVSTNRHDAPNRDLFSKGLFSGHADFFPWSGRHHEDEWSHDAIGKGTWDRGSQNEAASARLAIPPLKQKSGLNALATIFMGVLNQRRHRGQITAPSTFKPPPRVTLTDTKREVWLKDLANPTISLRRLSRTIPHGIRGRTLLDQCLNKTVPTERAVWLAKCVGANEIRAFKRKGAGGAFVMGGESKWVRDWTVLVEQFVEAVVSAFGEADWKARVTYAIRLATSLYSEQLLDRDHYLDWIVCGLESSPQSRIPMWIVIAQITWVDLLRSRKYGRRLTYALLGHLHAIYNDPDRDVLIQLSSQISGLLKALIQRNPESFISPNLWPRYRDTLRASLPVDDGLSQGAYHKVDARNSRLLVANTTSGPAGRQDLVKLVDSAVQGQNGRHLAAKCWATLDDKSEIVKIAVEWATSVHRPGLAKIYIVARLIKSWSTFNINATQPILDVLSDIRPGDRRRSKCVFHLVAELVRSRLFSVPHYMQWLIGRGGLHDAADIDPNNGPCASRLLIELPVHCLPESQKAQRSNLLRRAGQYSTTDEAHDISNALRCVDDTLGLSPHLANSDAQTKCFPLRKLLRRVSNSSKAVQTAIGAHLGDVFTTELLGKVDSIIALSIFHSVRAMLETVDDFFMLSHILKVCSTASDVEVLAACVDTVNSHLEVFLALECADALFGLLIDRLKAVSSEQGVVARPLLAALSSLARRLPFQQEIAIQLVRELAQSDRSNAIDACSPVSDNMAMQTQGAEGEVSEQIDKLLASGNIIDHPTMNRLFRIIIPKLEAGWAKGDESRRVFSSLLTRLRIFDTQHFDKLMADWVSHIRTLMDRPPLLELFPLLVSLGCLSISTMLHTANAGTPAAEEAPLYPGVTPSGSAVYLQELLQLLITALPKSTSLDSDEIYRFEIQQKSARSEQPKGLLLMIRNALIEYSALRDRGPGRDFLLDDAAYEDRLLETLKYLVVADSTAVAHVLNIGNLPVGATALVHKIITKLLIPDDNGGLETSFDQILGLANELTMPFCQLKLNLDLSVPQRSSGAGEMDDDNPSRFEAFAKAMDRAIEARNIMWTGMLPCLSQDITRNLSNQAHARFLDLMPSLKSTSFEDDAISEHRIHLAENLLGVLEAINSGQLPSKSAQLTANLVEKLSDLLEIVASKDEERAQAQKEVLSHWLPVLLRFITLNSISPEPLQSSNPNQSNAARIPVPLNHEARARMIIVLCGLLLELDSQPQTTGGALSQEVFDIAVLLVDALPDDLRVQCARLILFMPGGAASTSTTSDPRLYYLFSVPQPTSAENLKLTHRDKASIPYSAAARGMSAMYGMGPASQERLTPFMLRRWEILSEPTPNVGENDTSLSLSLFEAIRTQ |
Length | 1528 |
Position | Kinase |
Organism | Tolypocladium ophioglossoides CBS 100239 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Ophiocordycipitaceae> Tolypocladium. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.199 |
Instability index | 45.04 |
Isoelectric point | 7.84 |
Molecular weight | 168567.88 |
Publications | PubMed=26215153 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP04581 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 172.67| 44| 45| 658| 701| 1 --------------------------------------------------------------------------- 455- 500 (57.79/27.20) L....GHLH.AI..YNDPDRDvliQLSSQIsgLLKALIQRNPESFIS..PNLWPR 508- 547 (37.31/15.19) SlpvdDGLSQGAyhKVDARN.......SRL..LVANTT.....SGPAGRQDLVK. 658- 701 (77.57/38.79) R....GGLHDAA..DIDPNNG...PCASRL..LIELPVHCLPESQKAQRSNLLRR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 392.80| 86| 271| 1136| 1225| 2 --------------------------------------------------------------------------- 1136- 1219 (129.22/77.05) .....VLNIGNLPVGATALVHKIITKL......LIPDDNGGLETSFDQ........ILGLANELTMPFCQLKLNLDLSVPQRSSGA..G...EMDDDNPSRFEAFAKA 1224- 1285 (55.13/34.17) IEarnIMWTGMLPCLSQDITRNLSNQAharfldLMPSLKS...TSFED.............DAISEHRIHLAENL.LGV............................. 1286- 1362 (84.95/44.94) LE...AINSGQLPSKSAQLTANLVEKL.........SDLLEIVASKDEeraqaqkeVLSHWLPVLLRFITLN..........SISP..E...PLQSSNPNQSNA.... 1364- 1405 (34.27/13.89) .........................RI......PVPLNH...EARARM........IIVL........CGLLLELD.SQPQTTGGAlsQ...EVFD............ 1408- 1477 (89.23/50.45) .....VLLVDALPDDLRVQCARLI..L......FMPGGAASTSTTSDP.......................RLYYLFSVPQPTSAE..NlklTHRDKASIPYSAAARG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 128.10| 29| 144| 31| 61| 3 --------------------------------------------------------------------------- 33- 61 (51.96/33.13) LSTS..T...SPIRKDAHPDLTNEPVD..AAQGRHH 145- 174 (34.41/13.64) LRTS..TlapAQVKKDSRPKPYTVEVP..PAAPR.. 176- 208 (41.73/18.98) VSTNrhD...APNRDLFSKGLFSGHADffPWSGRHH --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 46.45| 13| 17| 566| 578| 5 --------------------------------------------------------------------------- 566- 578 (22.43/12.58) WATLDDKSEIVKI 582- 594 (24.02/13.98) WATSVHRPGLAKI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.98| 13| 17| 1089| 1101| 6 --------------------------------------------------------------------------- 1089- 1101 (22.02/13.40) RNALIEYSALRDR 1105- 1117 (22.96/14.30) RDFLLDDAAYEDR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 53.93| 16| 17| 292| 307| 7 --------------------------------------------------------------------------- 292- 307 (26.29/16.76) LANPTISLRRLSRTIP 310- 325 (27.64/18.06) IRGRTLLDQCLNKTVP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 32.56| 10| 18| 939| 948| 16 --------------------------------------------------------------------------- 939- 948 (16.82/ 8.98) RLFRIIIPKL 960- 969 (15.74/ 7.92) RVFSSLLTRL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) KLRLEL 2) MGVPPR | 71 1 | 76 6 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab