<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04536
Description |
Uncharacterized protein |
Sequence | MEQIQRPSSSRSYQLHPAKPIIIDLFNLYLGRSSRQKSDEQPPNKAQKRVTALNRDLPPPNERFVSDFEQVLRQFPDQEQLRLVTESVLISLVIQCSSHSPRAEFLLFALRSLCSIEHINWDTFVPSLLSAVSSAELSFGQGSQATPAVTSANVSQPGMPPSTNTISISSTFQSNPASPLISAQGIGSPAQSANEPSSALTSSPLKLNEISSNLQQSPLLVSSAIRDSAISSLRQLCCKIILISLDSTLKPATHAEILCHMQAWLVSWDQRHQASDDSDITKSWRPDKALIDWLHSCLDVVWLLVKEDKCRVPFYELLRSGLQFIENIPDDESLFTLIMEIHRRRDMMAMHMQMLDHHLHCPTFGTQRFLPLATPHFGGEVITNLRYSPITYPSVLGEPLHGEDLAVCIQKGTLDWDRALRCIRHALRTTPSPDWWKRVLLVAPCYRPHPNVSSSPGAVFTWDMICEATIDRIVELLKLTNSESNCWQEWLIFSDIFFFLMKSGCIDFVDFVDKLVLRLIEDDYHILRTNHVTWLLAQIIRVELVMNALNNDSRKVETTKKILSFHREDKSSDPNSPQSILLDFISSCQNLRIWSLNTLTRDHLNNEQLQKGKQIDEWWRQVSKGERMLDYMNMDERSIGMFWVVSYTMAQPACEMVMGWLTSAGTEVLPVSGIQSNERLVMMRETSPLPISLLSGFSINLCMKLAYQMEDSLFSGQVIPSIGMVETYTRLLLIAPYSLFRSHFSHLTQRNPSTLSKPLATLLVLEILNYRLLPLYRYEGKNKSLMYDVTKIVAALKGKRGDHRLFRLAENLCLNLILSLRDFFSVKKEGKGPTEFTETLNRIAITSLAIIIKTRGIAESEHLLYLPAMVEQILSSSQHTWSDKTLRYFPPVLRDTLVGRADKRGLAVQAWQQAETTVINQCTQLLSPSADPTYVVTYISHSFPQHRQYLCAGAWILMHGHPESINSANLARVLREFSPEEVTANIYTMVDVLLHHIHVEIQRGHPLQDLLLKASSNLAFFIWTHELLPLDILILALIDRDDDAHALHIVISLLDRQELQQRLKLFYLTRGPPEHWLYSGMFKRVDLQKALGHHLSWKERFPVIFDDIAARLLPVIPLVVYRLIENDAMDHAERVLVMYKQLLAYHPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPFSESFPQHIALSNSSACPPPDYFASLLLGLVNNVIPPLGSSSKSGSILDASYLSSRCPPNKTSITNQSGQTNVSEVQKAFYQIQDPGTYTQLVLETAVMELLSLPVSASQIVASLVQIVVHIQSTLIQSSNGLHGTSNSSGQTSVLPTSPSGGSTDSMNASRSAPPVSGLNTSNFVSRSGYTCQQLSCLLIQACGLLLAQLPQDFHIQLYLEVSRLVKETWWLTDGKRSPSELDSAVNYALLDPTWAAQDNTSTAIGNVVGLLHSFFSNLPQEWLEGAHVIIKQLRPITSVAMLRIVFRIMGPLLPRLANAHTLFNKTLSLLLGSMVDVFGKTAQPSVPAQASEIIDLIDFLHHVVHYEGQVGPVQSTSKPRAEVLVLFSRALESLRPDAQHLLSHLTTDVNSSVYASTHPKLVQNPMS |
Length | 1601 |
Position | Tail |
Organism | Spinacia oleracea (Spinach) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
Caryophyllales> Chenopodiaceae> Chenopodioideae> Anserineae> Spinacia.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.033 |
Instability index | 49.46 |
Isoelectric point | 6.60 |
Molecular weight | 179945.13 |
Publications | PubMed=24352233
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
transcription regulator complex GO:0005667 IBA:GO_Central
|
GO - Biological Function | |
GO - Biological Process | positive regulation of gene expression GO:0010628 IBA:GO_Central
regulation of transcription by RNA polymerase II GO:0006357 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP04536
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 465.60| 155| 183| 848| 1030| 1
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848- 1019 (229.49/184.10) LAIIikTRGiaESEHLLYlpaMVEQILsSSQHTWSDKTLRYF...PP..VLRDTLVGRAD.KRGLAVQ.AWQQAETTVINQCTQLLSPSAdPTYVVTYISHSFPQHRQYLCAGAWILMHGHPESInsaNLAR.VLREFS...PEEVTANIYTMVDVllhhIHVEIQRGHPlQDLLLKASSNLA
1035- 1200 (236.11/159.81) LALI..DRD..DDAHALH...IVISLL.DRQELQQRLKLFYLtrgPPehWLYSGMFKRVDlQKALGHHlSWKERFPVIFDDIAARLLPVI.PLVVYRLIENDAMDHAERVLVMYKQLLAYHPLRF...TFVRdILAYFYghlPGKLIVRILNVLDI....SKIPFSESFP.QHIALSNSSACP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 337.24| 110| 180| 1201| 1320| 2
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1201- 1320 (163.20/125.43) PPDYFASLLLgLVNNVIPP...LGSSSKSGSILDASYLSSRCPPNKTSITNQSGQT.NVSEVQKAFYqiqdpGTYTQLVLETAVMELLSL.PVSAsqiVAsLVQIVVHIQSTLIQSSNGLHGTSN
1384- 1498 (174.05/106.93) PQDFHIQLYL.EVSRLVKEtwwLTDGKRSPSELDSAVNYALLDPTWAAQDNTSTAIgNVVGLLHSFF.....SNLPQEWLEGAHVIIKQLrPITS...VA.MLRIVFRIMGPLLPRLANAHTLFN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.05| 16| 16| 131| 146| 3
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131- 146 (28.21/18.95) AVSSAELS.FGQ.GSQAT
148- 165 (18.84/ 9.67) AVTSANVSqPGMpPSTNT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.30| 30| 180| 302| 338| 5
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302- 338 (42.11/48.76) WLLVKEdkcrvPFYELLRSG.LQFIENIpdDESLFTLI
490- 520 (49.19/33.18) WLIFSD.....IFFFLMKSGcIDFVDFV..DKLVLRLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.88| 13| 19| 210| 222| 6
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168- 183 (16.33/ 6.56) ISSTFQSnpaSPLISA
210- 222 (23.55/12.93) ISSNLQQ...SPLLVS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.81| 24| 180| 413| 439| 7
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413- 439 (38.65/39.39) TLDWDRaLRciRHALRTTPSPD.WWKRV
598- 622 (41.16/27.91) TLTRDH.LN..NEQLQKGKQIDeWWRQV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.19| 13| 16| 368| 380| 8
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368- 380 (25.48/15.43) RFLPLATPHFGGE
386- 398 (24.71/14.72) RYSPITYPSVLGE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.20| 15| 109| 700| 715| 10
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700- 715 (24.68/21.06) NLCMKLAYQMEDsLFS
811- 825 (27.51/18.03) NLCLNLILSLRD.FFS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.20| 14| 16| 57| 72| 11
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57- 72 (21.09/19.57) LPPPNE.RFVSdfEQVL
75- 89 (20.10/10.34) FPDQEQlRLVT..ESVL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 161.61| 52| 793| 740| 795| 13
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740- 795 (82.84/61.02) FRSHFSHLT.QRNP..STlSKPLATLLVLEilnYRLLPLYRYEGKN..KSLMYDVTKIVAA
1533- 1589 (78.77/46.94) FLHHVVHYEgQVGPvqST.SKPRAEVLVLF...SRALESLRPDAQHllSHLTTDVNSSVYA
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