<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04518

Description Uncharacterized protein
SequenceMDLILLEDNHVSNTETAITAIKEEKLYVAVGKEVKQNETLLSWAIQNSGGRTISILHVHQPDNFIPILGEKFHWSSLKEQEVRAYRGIERQFMLKTLDEYIHFCRQFGVQAEKLYIEMDSVERGILQLIAEHDIEKLVMGAAQDDLYHTKMMELVSKKAVYVQQHAPAKCHIWFVCKGHLIHQRKCSSEARIHAQNERSINSKSLSLMGQSNKSTAVSEDLLLGEGSSQFGMSTGRVTKLPSMDNIETHVSPPELDLEANYHNWAWDEILQSELHTEPLFNQNHHRHLYSPRSVAQEISSEGVYAEVMSKNKELEGDIQKVKNERDKLREEYQDVMDQNLVLESRVENYDQVLKELEEGIIYNVDMLQICEKERDDLKIERDNVLKTAEELLNQSAEAASKTDSPRFFTTLTFAEIERATNDFDPSLQLWEGENGSIYRGTLSHTQVTIKMWHPEGPQGPREFHQEVEILSKFRHPNVVTLMGVCPEAWAVVYEYLPNGSLQERLNSTGNTPLLWQTRIRIATEICCALIFLHSCVPERVVHCALKPASVFLDSNFTCKIGDFGFSHLVSDQENLFSTEFPNSSSYTDPEYFITGVATPAIDVYSFGMILLELLTGKPAFGVTGELEDALNENSFDSVLDTSAGEWPFVQAEQLARLALRCCEENANDRPDLKSDVWRVLEPMRTSCGGSTSYHLGDEEHRQAPSYFICPIFQEVMKDPHVAADGYTYEAEALQGWLDSDHDTSPMTNLQLQHSNLVPNHALRSAIQEWRQRH
Length773
PositionTail
OrganismSpinacia oleracea (Spinach)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> Caryophyllales> Chenopodiaceae> Chenopodioideae> Anserineae> Spinacia.
Aromaticity0.08
Grand average of hydropathy-0.443
Instability index43.27
Isoelectric point5.05
Molecular weight88090.06
Publications
PubMed=24352233

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04518
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     163.82|      50|     290|     331|     416|       1
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  367-  416 (81.40/25.49)	LQICEKERDDLKIERDNVLKTAEELLNQSAEAAS.......KTDSPRFFTTLTFAEI
  659-  715 (82.42/45.39)	LRCCEENANDRPDLKSDVWRVLEPMRTSCGGSTSyhlgdeeHRQAPSYFICPIFQEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.14|      22|     292|     331|     353|       2
---------------------------------------------------------------------------
  304-  328 (31.78/17.31)	YAEVMSKNKELEGdiqKVKNERDKL
  332-  353 (38.36/21.84)	YQDVMDQNLVLES...RVENYDQVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.02|      26|      27|     594|     620|       4
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  594-  620 (40.67/32.94)	TGVATPAIDVYSFGMIlLELLTGKPAF
  623-  648 (45.34/31.85)	TGELEDALNENSFDSV.LDTSAGEWPF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04518 with Med32 domain of Kingdom Viridiplantae
Unable to open file!