<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04505

Description Uncharacterized protein
SequenceMFSSSRSLQNRLYVIRIDSKVSFSCLCTYLLQFGDMLKERGVAPFSKWDKELPKIVFDPRFKEIPTYAERRSLFEHYVRTRAEAERKEKRAAQKAAVEGFKQLLEEAKEDIDHTTTYHTFRKRWGHDQRFEALERKDREVFLNERVLSLKRVAEEKIRAERTVVVSNFKSMLRERGDVTASSRWSRVKDGLRDDSRYKAVKHEEREALFNAYISELKAADDEVEREAKAKREEQEKLKERERELRKRKEREEQQMERVRSKVRRKEAVASYLALLVETIKSHQASWTESKPKLVKDPQGRASNPDLDESDLERLFREHVKMLYERCACDFRALLVEKITPEAATRETEDGKTVLNSWSTAKKFLKSDPRYTKMPRKDREALWKRHAEELQRKQKGAVEQKGDQYNESKNRNANDSGRPLSVSRSGQDWR
Length429
PositionUnknown
OrganismSpinacia oleracea (Spinach)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> Caryophyllales> Chenopodiaceae> Chenopodioideae> Anserineae> Spinacia.
Aromaticity0.08
Grand average of hydropathy-1.097
Instability index47.16
Isoelectric point9.59
Molecular weight50827.93
Publications
PubMed=24352233

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04505
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     405.37|      66|      66|      85|     150|       1
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   58-  126 (84.00/41.94)	DPRFKE....IptyaERRSlFEHYVRTR........aeaER..KEKRA..AQKAAVEGFKQLLEEA..KEDIDHTT...TYHTFRKRWGH
  127-  186 (79.65/39.42)	DQRFEA....L....ERKD.REVFLNERVLSLK...rvaEE..K.IRA..ERTVVVSNFKSMLRE...RGDVTASS..........RWSR
  194-  247 (51.41/23.00)	DSRYKA....V....KHEE.REALFNAYISELKaaddevEReaKAKRE..EQE.......KLKERE..RE.............LRKR...
  248-  295 (49.18/21.71)	.................KE.REEQQMERVRS.................kvRRKEAVASYLALLVET..IK..SHQA...SWTESKPKLVK
  296-  366 (66.04/31.50)	DPQGRAsnpdL....DESD.LERLFREHVKMLY....erCA..CDFRA.....LLVE...KITPEAatRETEDGKTvlnSWSTAKKFLKS
  367-  426 (75.08/36.76)	DPRYTK....M....PRKD.REAL.......WKrhaeelQR..K.......QKGAVEQKGDQYNES..KNRNANDS...GRPLSVSRSGQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04505 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PRKDREALWKRHAEELQRKQKGAVEQKGDQYNESKNRNANDSGRPLSVSRSGQDW
2) VEREAKAKREEQEKLKERERELRKRKEREEQQMERVRS
374
223
428
260










Molecular Recognition Features






MoRF SequenceStartStop




1) LQRKQKGAVEQKGDQYN
2) RLYVIR
3) WSTAKKFLKSDPRYTKM
389
11
357
405
16
373