<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04498

Description Uncharacterized protein
SequenceMLTDEQSASTETGCNKLPIVLTTGQTPLHSSSSIEPSSTGLSQISDFSQSTSSSDVHDAPNVNDFNARRITSPTSTTSAYTDLSSVGQMSVPDSHVSYEQVRILSSECVVEAEKVNAATEREETMRKIAEQEKVKLVKAERDAQAAKNMLAKESYERQIAEVNALKELKERQKVVDNLISNERRIRRYTPDEIRMATDDLSEKKVIGEGGYGKVYRGTLDHTPVAIKVLEHDAADKKEEFLREIRILSQLCHPNIVLLLGVCSEMGCLVYEYMENGSLEDHIFRQKGRPPLPWFARFRIAFEIACGLAFLHRRKPEPIVHRDLKPGNILLGRNYVTKISDVGLAKLVSDNIPDSVTMFGNSLLAGTLYYIDPEYQRTGTVRPKSDLYSFGIILLQLLTARSPNGLLLVMENAIASGSLPYILDDSIKDWPRAEVEELTKLALECCKLRCRDRPDLETGVLPILRKLADVADASMKVERNSIFAPSHYFCPILHEIMDDPHVAADGFTYERRAIEAWLERHDISPVTKQRMTHFNLTPNMTLLTAIQEWKSRLASSVHA
Length558
PositionTail
OrganismSpinacia oleracea (Spinach)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> Caryophyllales> Chenopodiaceae> Chenopodioideae> Anserineae> Spinacia.
Aromaticity0.06
Grand average of hydropathy-0.330
Instability index44.65
Isoelectric point5.91
Molecular weight62616.70
Publications
PubMed=24352233

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04498
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.53|      22|      30|     148|     177|       1
---------------------------------------------------------------------------
  118-  142 (26.94/15.33)	ATEREEtmRKIAEQEKVKLVKaERD
  151-  172 (36.58/26.15)	AKESYE..RQIAEVNALKELK.ERQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.56|      17|      32|     188|     204|       3
---------------------------------------------------------------------------
  188-  204 (29.72/24.64)	YTPDEIRMATDDLSEKK
  221-  237 (28.84/23.67)	HTPVAIKVLEHDAADKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.25|      11|      15|      37|      47|       4
---------------------------------------------------------------------------
   37-   47 (18.85/10.84)	SST..GLSQISDF
   53-   65 (15.39/ 7.68)	SSDvhDAPNVNDF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04498 with Med32 domain of Kingdom Viridiplantae
Unable to open file!