<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04477

Description Uncharacterized protein
SequenceMAIATEKNTVWETVVALTKVAQQKGTDPFLWAIQISSNLSCAGVSLPSIELSHTMVSYILWDNNVPSAWKFLERALMLNMVPPLLVLALLSTRVIPCRHSQPTGYRLYMELLKRHAFKLKSQISVPAFGKVMMSIDHVLCLSQIFDSRASEPDILLVEFVFTIVWQLLDALLDDEGLLELTTEKKSLWAITTREMDIDPYDNYDEKKFEQLDRLKRMNTEMAVEIIGQFFQNGVTSRMIFLVRHNMPKQWSAFTERLELLATNSSTLKNPEILSPKMLSKLTSDARKVSSWEYKKSGEVFSAESAFRSMVFPAQCQETYHSGLWLPLDVVLEDMMDGSQVTATSAVEIITGLVKSLQAINNTTWHDTFLALWIGALRFVQRERDPMEGPVPRLDTRMCVLLSITPLVVADLIEEEENPLDESDNWKERHEPYTRRKSLVSCLQILGDFQSLLSPPQSIVSSANLAAARAMMFVAGIDVADGYFECINVNDLPINCTGNMRHLIIEACIARNLLDTSAYFWPGYVNGQINQFPSRIPSQVPGWSSLVQGVSLRPVMINSMVAAPASSLAELEKIFELAVSGSEDEKIYAATILCGASLIRGWNVQEHIVSFITRLLSPPVPADFVGDDSHLIAYAPMLFVLLIGIAPLDCVQIFSLHGLVPQLAASLMTICEVFGSCVPNVSWTVNGEEISAHAVFSNAFALLLKLWRFNHPPLDYGVGDVPPVVSQLTPEYLLLVRNSLLASSGNILKDHNKRRLSAIVGASCPKPIFVDSFPKLKVWYRQHQACIAAPLSGLISESPVHQIVEVLLNMIFRKISRGVKASATSGSSSSSGPASEDSSLRPQMPAWDILEAVPYVVDAALSACAHGQVTPRELATGLKDLADFLPASLATIVSYFSAEVTRGIWKPALMNGTDWPSPAANLSNVEEQIKKILAATGVDVPSLAAEVSSPATLPLPLAAFLSLTITYKLDKVSQRFLNLAGPALESLAADCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLHDNNAVVQLFRSCFSSTLGLSTNPSTSRGGVAALLGHGFGSHLNGGISPVAPGILYLRVYRSVREIMYMAEEIISLLMQSVREIVGAGTFKQTRKKLKTGPLYGQVSVDAAMTKVKLAASLAATLLWLSGGQSLVQCLLKETLPSWFISVQRCALEEEEESEEIVSAFRGYALAYFAVLCVAFAWGVDSSSAASKRRPIILGHYLEFIASALDGKISLGCDSVVWQAYVSRFISLMVGCTPNWVVEMDVNVLIRLSKGLVQWNEDIAFALLTTGGMNTMGAAAKLIVESEK
Length1314
PositionTail
OrganismSpinacia oleracea (Spinach)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> Caryophyllales> Chenopodiaceae> Chenopodioideae> Anserineae> Spinacia.
Aromaticity0.08
Grand average of hydropathy0.215
Instability index45.46
Isoelectric point5.76
Molecular weight144362.69
Publications
PubMed=24352233

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04477
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     354.73|     115|     157|     299|     455|       1
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  299-  428 (177.77/142.05)	VFSAE..SAFRSMVF.......PAQCQETYH.SGLWLPLDVVLEDMMD..GSQVTATSAVeiITGLVKSLQAINNTTWhDTFLALWigalRFVQRERDPMEGPVPRldtrmcVLLSITP....LVVADLIEEEENPLdeSDNWKER
  624-  754 (176.96/87.03)	VGDDShlIAYAPMLFvlligiaPLDCVQIFSlHGLVPQLAASLMTICEvfGSCVPNVSWT..VNGEEISAHAVFSNAF.ALLLKLW....RFNHPPLDYGVGDVPP......VVSQLTPeyllLVRNSLLASSGNIL..KDHNKRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     630.98|     202|     210|     837|    1046|       2
---------------------------------------------------------------------------
  837- 1046 (320.67/213.94)	SSLRPQMPAWdILEAVPYVVDAALSACAHGQV......TPRELATGLKDLADFLPASLATIVSYFSAEVTRGIWKPALMNGtdWPSPAANLSNVeeQIKKILAATGVDVPSLAAEVSSPATLPLPlAAFLSL.TITYKLDKVSQRFLN.LAGPALESLAADCPWPCMPIVASlwTQKAKR....WSDFLVFSASR...TVFLHDNNAVVQLFRSCFSSTL.GLSTN
 1048- 1265 (310.31/183.51)	STSRGGVAAL.LGHGFGSHLNGGISPVAPGILylrvyrSVREIMYMAEEIISLLMQSVREIVGAGTFKQTRKKLKTGPLYG..QVSVDAAMTKV..KLAASLAATLLWLSGGQSLVQCLLKETLP.SWFISVqRCALEEEEESEEIVSaFRGYALAYFAVLCVAFAWGVDSS..SAASKRrpiiLGHYLEFIASAldgKISLGCDSVVWQAYVSRFISLMvGCTPN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04477 with Med33 domain of Kingdom Viridiplantae
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