<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04472

Description Putative Kinase
SequenceMKRADEDTHYVTVGVAIDKDKGSQAALKWTVDHLVGKGETILLIHVVTKNNAVISEEYTKELFLPFRCFSLRKEVKCRDVTLQGSDVAKCVNEYVKENAIQKLVVGASTKNAIIRRFKSSDIATSISKGAPDFCTVYTISKGRVTSTRKASRTLPMPSGIVLSPSSRSSQVSEVDLSIPITSSMHVGNVHHRLPGYLSTNSSIASPAASDNVQSPFSRSWNVKSYSDYKMIQNDISFVSNGRPGEIDNNNQLLPSAHDDLGIPRTSRLSSEMSFDGRMSSDYLGRHSSFSQDSFGSVGQNISMDTFLNKNGQQEEMELEMRRLKLELSKTMDMYSTACKEALTARQEAGEYHKMTLAEQQKVNEARIAEERALALAQKEMEKRKEACEEAQAAKKRAEIESRKRMNAEQQAKLAPASAEIRCRKYSIEEIENATEYFSINRKIGEGSYGPVFKARLDHTAVAIKVLRPDATQGKHQFQQEVEILSSIRHPHMVLLLGACPEYGCLVYEYMSNGSLEDRLFQRENSPVLPWQYRFRIAAEIATGLLFLHQSKPEPLVHRDLKPGNILLDGNYVSKIGDVGLARLVPANNTANNSTQYHMTSTAGTFCYIDPEYQQTGMLSTKSDIYSLGVLLLQIVTGKQPMGLAHYVEKAMEKGTVVEIFDPKVLDWPIQEAISFTKVSLGCAQLRRKDRPDLGEVILPELNRLRDLADEMPPLGFQGHGNGGGSNSYQSRTSSRSRASSSGSSRQDVLTNSDIESPLERSSQNSNYGKKY
Length771
PositionTail
OrganismZostera marina (Eelgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Zosteraceae> Zostera.
Aromaticity0.07
Grand average of hydropathy-0.496
Instability index49.98
Isoelectric point8.41
Molecular weight85763.04
Publications
PubMed=26814964

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04472
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     190.56|      47|      48|     319|     365|       1
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  267-  315 (51.34/29.67)	...RLSSEMSFDGRMSSDYLGRHSSFSQDSfgsvG.QNISMdTFLNKN.GQQEE
  319-  365 (79.31/49.71)	EMRRLKLELSKTMDMYSTACKEALTARQEA....G.EYHKM.TLAEQQ.KVNEA
  369-  416 (59.91/35.81)	EERALALA.QKEMEKRKEACEEAQAAKKRA....EiESRKR.MNAEQQaKLAPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     116.05|      31|      34|     156|     186|       3
---------------------------------------------------------------------------
  120-  150 (33.26/16.97)	................SDIATSISKGAPDF.CTV.Y.....TISkgrVTSTRKA
  156-  186 (54.06/31.85)	MP..............SGIVLSPSSRSSQV.SEVDL.....SIP...ITSSMHV
  193-  242 (28.73/13.73)	LPgylstnssiaspaaSDNVQSPFSRSWNVkSYSDYkmiqnDIS...FVSNGR.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.50|      42|     585|       4|      48|       4
---------------------------------------------------------------------------
    4-   48 (62.30/55.16)	ADEDTHY...VTVGV..AIDKDKgSQAALKWTVDHLVGKGetILLIHVVT
  590-  636 (62.20/43.09)	ANNSTQYhmtSTAGTfcYIDPEY.QQTGMLSTKSDIYSLG..VLLLQIVT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04472 with Med32 domain of Kingdom Viridiplantae
Unable to open file!