Description | Mediator of RNA polymerase II transcription subunit |
Sequence | MNKPGSGPMTSSVASTLQKKKKILDKVDTEVNNMIENFTSIIREARISDHSVQNSLEKFQMDLQSKKMNQSAQVLTDVVSELKKTAIFSNFQALNEHVEKRIALYTQQVEETNQKFSDIAEQAAANLKEAEESYYSSAYKEGLPKQSIAAEHISSILKNSMQRRQSLKPNTTKQDNDHNTKQDDVKQDDIMQDDVK |
Length | 196 |
Position | Head |
Organism | Zostera marina (Eelgrass) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Zosteraceae> Zostera. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.886 |
Instability index | 46.67 |
Isoelectric point | 6.12 |
Molecular weight | 22227.62 |
Publications | PubMed=26814964 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP04447 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 85.57| 28| 29| 88| 115| 1 --------------------------------------------------------------------------- 88- 115 (46.14/27.67) FSNF..QALNEHVEKRIALYTQQVEETNQK 116- 145 (39.42/22.83) FSDIaeQAAANLKEAEESYYSSAYKEGLPK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IMQDDVK 2) YYSSAY | 190 134 | 196 139 |
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