<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04446
Description |
ATP-dependent DNA helicase |
Sequence | MESGDIETELLCVETELEEVQDQIGILFDRQERLCEKQSSLRALLEESKADEIECGGIPVTLNEDWSKSFDWDSDADKIRFNTFGIPNYRPNQREIINAIMSGRDVLVIMAAGGGKSLCYQLPAVLRDGLALVVSPLLSLIQDQVMGLTALGISAHMLTSTTSKENEKFIYKTLEKGNGELKILYVTPEKISKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPKVPVVALTATATYKVQTDLMEMLHIPKCVKFVSTINRPNIFYKVCEKSSIANVVVDEIADFIRNSYPNNESGIVYCFTRKECVQVAMELQQRGITADHYHADMDANVREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYFTPADAPRQSSMVFYENSGLQNLYDIVRYCQSKRTCRRNAFFQHFAEPLQDCNGMCDNCAYGTDVEEVDATCHTKVLISLLQEMQKIEQRTTILQMADKLRIKTKTLVPCLKKEDLEKLIVQLIVDRILHTAYSTNAYITVGPLWSHVVKDKKVIKLVLSGEHGSRSTTTSKKRKSLASGLEVKLDELRKEISSSHGGIFPHSVLSAQQIAILSSERPTSINQLEKLIGKLKTDKLGRRIIDLIQQFTSYEASESREKEEHQEQMNVKRRKKNKTIESGEDGVE |
Length | 699 |
Position | Unknown |
Organism | Zostera marina (Eelgrass) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Zosteraceae> Zostera.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.353 |
Instability index | 43.05 |
Isoelectric point | 7.50 |
Molecular weight | 79074.95 |
Publications | PubMed=26814964
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Function
Annotated function |
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GO - Cellular Component | chromosome GO:0005694 IBA:GO_Central
cytoplasm GO:0005737 IBA:GO_Central
mediator complex GO:0016592 IBA:GO_Central
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GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IBA:GO_Central
ATP binding GO:0005524 IEA:UniProtKB-KW
four-way junction helicase activity GO:0009378 IBA:GO_Central
nucleic acid binding GO:0003676 IEA:InterPro
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GO - Biological Process | DNA duplex unwinding GO:0032508 IBA:GO_Central
DNA recombination GO:0006310 IBA:GO_Central
DNA repair GO:0006281 IBA:GO_Central
DNA unwinding involved in DNA replication GO:0006268 IBA:GO_Central
double-strand break repair via homologous recombination GO:0000724 IBA:GO_Central
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Interaction
Repeat regions
Repeats |
>MDP04446
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.72| 13| 27| 47| 59| 1
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47- 59 (25.39/15.59) ESKADEIECG..GIP
73- 87 (20.33/11.17) DSDADKIRFNtfGIP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.21| 11| 107| 531| 543| 2
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531- 541 (18.19/ 6.95) LEKLIVQLIVD
639- 649 (18.01/ 6.75) LEKLIGKLKTD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.64| 23| 28| 157| 184| 3
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161- 184 (34.33/27.62) TTSK..ENEKFIYKtLEK..GNGELKIL
187- 213 (29.31/10.74) TPEKisKSKRFMSK.LEKchNAGRLSLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.37| 12| 28| 349| 360| 4
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349- 360 (23.05/17.80) NVREKVHMRWSK
380- 391 (21.33/15.91) DVRFVIHHSLSK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 88.72| 22| 123| 304| 325| 5
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304- 325 (43.58/28.86) FIRNSYPNNESGIV.YCFTRKEC
416- 430 (19.02/ 8.76) FTPADAPRQSSMVF.Y.......
431- 451 (26.12/14.57) ..ENSGLQNLYDIVrYCQSKRTC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.69| 11| 28| 488| 498| 7
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488- 498 (17.62/12.60) HTKVLISLLQE
518- 528 (19.07/14.28) KTKTLVPCLKK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.32| 16| 120| 564| 579| 8
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564- 579 (27.33/19.35) VKDKKVIKLVLSGEHG
682- 697 (28.00/20.01) VKRRKKNKTIESGEDG
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