<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04414

Description Putative Kinase
SequenceMRNPKGGSWGIDAIQPQVAVSIDKDKGSQAALKWTLENLVNRGQTLLLIHVKHKNFNQPNNEAYAKEIFLPFRCFCTRKDVMCKDVILEDGDIAKGVIEYTTQNAIEKLVLGAASRSGFARFKTSDVPTAISKGAPDFCTVYIISKGKVSSCRTATRPAPTISRFRPKSMEVGIDDGDAVDNLFQPSSPMISQLSNFITPHAKSTESRPCMNVPSFQEEQNLISSLAKKSTPKQQMKSYGDVSSAEDSFSDFSFTSSSRHSVDKMFPSLFDDMDGPRSNGFSNTMADSLDLMSCPQSGGDLLFTQESSSNRASGGSRSSLTMDNTESEMKRLRLELKQTMDMYNAACKEAVTAQQKTKEISHWKSTMEDDASYIHTNCKKYTIEEIEAATDQFKPSRKIGEGGYGPVYKCHLNDMEVAIKTLRPDASQGQSQFNQEVEVLSRIQHPNMVNLLGTCPEYGCLIYEYLSHGSLEDRLLRLGDTTVLPWQLRFKIAAEICTGLLFLHQMKPEPIVHRDLKPANILLDRNYVSKISDVGLARLVPPNVANDITQYRMTSAAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHSIESCIQNGTFKEILDPAVKDWPVEEALSYAKIALQCAELRRKDRPDLEKVVLPEMNRLKALAEENMHHGMLGGGGDNHPDVVDVEYSPQYSGVSMSTVGSSTSF
Length705
PositionTail
OrganismZostera marina (Eelgrass)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Zosteraceae> Zostera.
Aromaticity0.07
Grand average of hydropathy-0.393
Instability index46.02
Isoelectric point5.99
Molecular weight78153.00
Publications
PubMed=26814964

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04414
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.26|      17|     160|     201|     242|       1
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  184-  200 (32.18/33.42)	FQPSSPMISQLSNFITP
  216-  232 (29.08/21.28)	FQEEQNLISSLAKKSTP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.05|      22|      29|     121|     143|       2
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  121-  143 (36.83/30.77)	RFKTSDVPTaISKGAPDFCTVYI
  153-  174 (40.22/28.50)	RTATRPAPT.ISRFRPKSMEVGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.64|      36|     168|     415|     501|       4
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  415-  450 (60.99/123.18)	ME...VAIKTLRPDASQGQSQFNQEV.EV.LSRIQHPNMVN
  506-  546 (45.65/ 9.38)	MKpepIVHRDLKPANILLDRNYVSKIsDVgLARLVPPNVAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.31|      38|     168|     464|     501|       6
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  464-  501 (67.97/54.16)	EYLSHG..SLEDRLLRLGD.....TTVLPWQLRFKIAAE..ICTGLL
  626-  672 (51.34/39.02)	EALSYAkiALQCAELRRKDrpdleKVVLPEMNRLKALAEenMHHGML
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04414 with Med32 domain of Kingdom Viridiplantae
Unable to open file!