<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04352

Description "BMA-ATF-2, isoform c"
SequenceMDGLDIESCSSSHSSSSLRGLNLICSTNHIDRRPSDSSNSSETSISPAPSNINSNRRTSIHESIRDDMFWEKRRHNNDITKKSRERRRMNDMIMEQKLLELTKENNLLRSRLKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQQTLRLVTSAAHDTVIVSTAQRKNNIDVMIPTVPSLPVSSVTTLAANLANVIGPPSKLPAMFPTHLFTATPLLTTSSGSVPSPIFPSSATAPTSLLTPAGASATSQVSASAAQQLPALQICTLQAALQQVQQNYCSSSGPTTISSGHGAFQPFHSSRDPTSSTQSYSPDSSTADIAPLDYSMHGTTHKETSSDSSSHILRYELLERQPDLSTETETEQQISNDTLAQSSSSSDKARESDTDDKPRSLLGSLLSTKRTSPLVAQSRTDTHSGLNNSSPKDNDLKNCLSSLAVNLSNALTVPGTRTVISDVSSKPDTVYSGKTIKSDSSDSMESPTSNNSTTDSMRSQLSPAPKHSAIVKALRSRPSSKQQYIDRRRRNNEAAKRCRANRRAQFEYRSKRAQQLEAENDELRREMNRLNQELEQLKALHAAKNANIL
Length590
PositionKinase
OrganismBrugia malayi (Filarial nematode worm)
KingdomMetazoa
Lineage
Aromaticity0.03
Grand average of hydropathy-0.917
Instability index82.81
Isoelectric point9.11
Molecular weight65230.07
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats
>MDP04352
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.70|      15|      15|     114|     128|       1
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  114-  128 (34.42/14.06)	QQQQQQQQQQQQQQQ
  131-  145 (34.42/14.06)	QQQQQQQQQQQQQQQ
  146-  157 (21.87/ 6.89)	QQQQQQQQQEQQ...
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.51|      16|      20|     214|     229|       2
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  214-  229 (31.00/17.05)	PA.MFPTHLFTATPLLT
  236-  252 (24.50/12.11)	PSpIFPSSATAPTSLLT
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      85.84|      20|      20|     514|     533|       3
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   80-   91 (21.27/ 9.65)	TKKSR........ERRRMND
  514-  533 (34.18/19.74)	ALRSRPSSKQQYIDRRRRNN
  536-  555 (30.39/16.78)	AKRCRANRRAQFEYRSKRAQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.10|      14|      15|     480|     493|       4
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    2-   14 (22.58/ 9.60)	DGLD.IESCSSSHS
  480-  493 (26.62/12.74)	DSSDSMESPTSNNS
  496-  509 (25.90/12.18)	DSMRSQLSPAPKHS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.65|      14|      20|     279|     296|       5
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  279-  296 (21.07/17.18)	QAALQQvqqnYCSSSGPT
  302-  315 (28.57/13.59)	HGAFQP....FHSSRDPT
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.15|      15|      20|     172|     190|       6
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  172-  186 (26.27/27.41)	VS..TAQRKNNIDVMIP
  193-  209 (19.87/ 7.08)	VSsvTTLAANLANVIGP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.28|      19|      23|     324|     345|       7
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  324-  345 (26.22/24.67)	DSStADIapLDYSMHG.....TTHKET
  348-  371 (27.05/14.00)	DSS.SHI..LRYELLErqpdlSTETET
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.57|      14|      20|     449|     462|       8
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  449-  462 (23.32/16.06)	SNALTVPGTRTVIS
  466-  479 (24.24/16.99)	SKPDTVYSGKTIKS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.32|      26|      39|     381|     406|       9
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  381-  406 (42.59/21.38)	AQSSSSSDKA..RESDTDDKPRSLLGSL
  417-  444 (40.73/20.13)	AQSRTDTHSGlnNSSPKDNDLKNCLSSL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04352 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GLNLICSTNHIDRRPSDSSNSSETSISPAPSNINSNRRTSIHESIRDDMFWEKRRHNNDITKKSRERRRMNDMIMEQKLLELTKENNLLRSRLKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQQTLRLVT
2) LTVPGTRTVISDVSSKPDTVYSGKTIKSDSSDSMESPTSNNSTTDSMRSQLSPAPKHSAIVKALRSRPSSKQQYIDRRRRNNEAAKRCRANRRAQFEYRSKRAQQLEAENDELRREMNRLNQELEQLKALHAAKNANIL
3) SGHGAFQPFHSSRDPTSSTQSYSPDSSTADIAPLDYSMHGTTHKETSSDSSSHILRYELLERQPDLSTETETEQQISNDTLAQSSSSSDKARESDTDDKPRSLLGSLLSTKRTSPLVAQSRTDTHSGLNNSSPKDNDLKNCLS
20
452
300
163
590
442










Molecular Recognition Features






MoRF SequenceStartStop




1) AIVKALR
2) KQQYIDRRRR
3) RYELLER
510
522
355
516
531
361