<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04350
Description |
BMA-RGR-1 |
Sequence | MDDEEYMKPMLPTVPEKCGPPVIPLGHLIEFAVQQIFHELTVLSELLPKKLDSDRKISIVQFAHSTRVLFIKLLAVVKWVKSSKKFESCASICYFLDQQSQYFVDTADRLVQLAREELVFARLPIFQVALAVDVLTVGTFPRLPLCIKSRFIPDPPITSREEACVLARLNQVIQYRLSSYGTKLSPRISKTVIRNGMVTMTVNGEFEVSLTLLGERPATKWTLLNIKILVEDYEIGFGTKLVHPLQVNMLHNVLQLRMDKSLEPLEEVYNLLHSFAQMLQLDVLFCQATQVFSGDMCQYAAIERYDRNMGILTLAYWLKRTHNRYTSQYKIKIFIDKENQHNGLRVRHFPVGKGLPYIDDRSGRLSINRLLSETVGVRCRERLLRIRERLGLLKPPVIVSLTGRAAPTLTYPLLGAQSHADEMLVVSVNDFSGNVIAVVRALGSCTELRELEQLIDDRVPLQTITDKMERLRILLMLERYRKAVAPLPVRIVPENVFCARLSSLPELPPDRICLQFIKEEMYYLIVSFTPNGQIGVNIDMYLLSNVERKLNMVRLHPSQLLTTLPESSFLSGKSDDDLEPPTKRRRWLGDKRLLTSAVATLDDRLAFMRICEELERRNVKYKPLTVEPTVGGLILHITDFSEAIPAGSDDFFSSVINCCLRLDTRTRVIWPFECTLINTPLVADFYEPIMHVDYESAKTKTTVLEIHGSGGVSSPNTSESVSTHMIDRLIVFAHMFDPVKEFAAAYYSHYNKYCNVVAFTYHKLVLAYGSNRNMLMMLSWRTQKAPNNKQYFYLTFGIGPSRATTTADLSNSEILWNPHILLASRLQERFNKQRSLIGLVQYLIDSVAPLSALHSFTRIRLQSLRAFCQMMCYDAALALSLQVTLSIVDEYRIRLIYGHVHLEFFLLGNSRIGLRDCSLGSACAFRLRQFCSNFLSPELRSANEEKSPSAFAWTATSSGPGSLPSHQMVRSPASRIVSSPMSHMSLSVPPLDSFGSSLRYSSDCRSRTPILLDHDSLHCMTSVDESGSCALDQYLFALAYLSKLGPALEGYRREHRGSGAHPVIQFRQLIATAESVRLSVLGAAPPNLKHEPFLVNMNIYLDEETMNGEDIPADNDIRTAELYFVRFVARLGNEIAVVAFANACRLAAPGAFSAITRIMSVQMNWTEDTPWRPSIQLVMWSQEGSVPRARISPGIVIDQTNISVLILLCLRPARHNPSEKNADASKHLIPLIYNTQTNTVARRSSGADDDASNATTVLSNISEQYSLTNEPALWPAIYSLAHNFTVQR |
Length | 1288 |
Position | Tail |
Organism | Brugia malayi (Filarial nematode worm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida>
Spirurina> Spiruromorpha> Filarioidea> Onchocercidae> Brugia.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.038 |
Instability index | 46.25 |
Isoelectric point | 8.45 |
Molecular weight | 145409.53 |
Publications | PubMed=17885136
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP04350
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 291.83| 94| 298| 694| 798| 1
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694- 798 (148.25/133.06) YES.AKTKTTVLEIHGS.GGVSSPNtsESVSTHMIDRLIVFAHM..FDPVKEfaaAY.YSHYNKYCNVVaFTYHKLVLAYGSNRnmlmmLSWRTQKAPNNK.QYFYLTFGI
1000- 1099 (143.58/99.04) YSSdCRSRTPILLDHDSlHCMTSVD..ESGSCALDQYLFALAYLskLGPALE...GYrREHRGSGAHPV.IQFRQLIATAESVR.....LSVLGAAPPNLKhEPFLVNMNI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.72| 14| 15| 111| 124| 2
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111- 124 (22.89/14.59) VQLAREELVFARLP
128- 141 (22.83/14.54) VALAVDVLTVGTFP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 196.09| 63| 251| 220| 283| 3
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220- 283 (103.76/58.83) KWTLLNIKILVEDYE...IGFGTKLVhPLQV..NMLHNVLQLRMDK.SLEPL.EEVYNLLHSFAQMLQLDV
467- 536 (92.33/47.99) KMERLRILLMLERYRkavAPLPVRIV.PENVfcARLSSLPELPPDRiCLQFIkEEMYYLIVSFTPNGQIGV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 158.23| 51| 251| 555| 610| 4
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555- 610 (72.33/68.73) LHPSQLLTTlPEsSFLSGKSDDDLEpptKRRRWLGDKRLLTSAVATLDDRLAFMRI
809- 859 (85.90/60.29) LSNSEILWN.PH.ILLASRLQERFN...KQRSLIGLVQYLIDSVAPLSALHSFTRI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.64| 11| 579| 285| 302| 7
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285- 302 (17.57/25.88) FCQAtqvfsgdMCQYAAI
867- 877 (25.07/14.82) FCQM.......MCYDAAL
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