<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04345
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSEGSNFSDDSSSDGKEEFTRFSSEKFTDNIKYNWNLEKEFSRNNNKHDEEFEEILSYLPSVPQSHNSGMIPFGSLLQFASHKISQELIVLSELIPKAYDQSKKISLVEFSFVAMNLFSKILAILKWYRYFKKYRLCTPIQYFLDQQSQIFRDTADALYTIAKVELRGARLPYFEMEAALNNIWQNFNCLPLAIKKRFVSDPPVSKIDQKIILSRLNHVLKNRLSLISTKIPIVITDITIRNGTVSLKVNGEYETVLTLLSSDICEKWTLLHIKILVEQHDIGYGTTLVHPLQLHKVHQHLQKLMNESNNPINTMHDFMHKFCLSLQLDVIFCEATQLIQNQYNRKLIIEKYDMDGGKLVISYWPKYNGKKIFPSQYKLIITHSKSTSFHGLLVYHMPYKSNMPQLDTNTGRLSLNTLIGTTTAIRAKEKLQILRKKLNKINPIAGILISGELLQIIKFPLLEDINISEDEYLYFTVNRFTGVYFCSFKYDDSDENISKLNETLNNNGHINEIQRIINNIRVNFLMKKYKEIISLNYLVVSEAILPEKAREFLKDKEKDRICIKFHRDLPYYCIFFFTKYIGNGISISQHIVFKNSNDEVIIFPFNDVIQEPKEEDIESNINTKLLFKNSSNTPKISHLSSEIKNLILVMDMKVRHLRLTEDFKKKGITVEPINREKPNDPIKLKINFIPFLLPKDLQFLNNIKNLLVFCDNRAKLLWPFEFYIQNIPIIADFYKHTLLEDVSTKHCGKRNFILSSRTSLSMACTSASLDIVSTNFIEKIAICTMIYKQVFHFSKYYYAYYRKFCNIKIFNFQKLIIAYGKNRDQLMFLTYKPSRKTYIMSFGVDSPRNFVNGSNDVYQFSNQTYINIHNSVSLYIHEMTRKEYFLRDVIHYLVNTTDALTYLYRSIKPKFISTEAFGQISRETIFHNQEFRFELFIVDEHSFRLSNGIFSLGIYVYDINFVYIKDCSYGEPSLIGLQNFLKVQTQNVTSKSLNQMNPVERNAYFTTSRKVYRLSLSAFERLTSLNTIDENYSVLGKYLINLRSFDKLRIIFSQQKEKTISKGCNIRFNDFQRTSFYIKVAFQGATLPNGTIPCTIHFTVYLEPNTFDLKAKIEYEGSFKPSESEIKMAEEYFEKVLSNGNCPQGVYSFINILRLTYPMSFANLTLLMELEMKPPSNHYYRLSLDLVSNDHRNSDQTVQYSPSFLIDEKSFRVLVPVSLRPQKRESKDSKCIDPDRLKLNAVWDIKNNRLNLHKPATDLMKFINDKIKKHNEIAKENNECVIESCIKILLIHQLKEPVVIT |
Length | 1301 |
Position | Tail |
Organism | Strongyloides venezuelensis (Threadworm) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida>
Tylenchina> Panagrolaimomorpha> Strongyloidoidea> Strongyloididae>
Strongyloides.
|
Aromaticity | 0.12 |
Grand average of hydropathy | -0.267 |
Instability index | 37.45 |
Isoelectric point | 9.04 |
Molecular weight | 152024.83 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP04345
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 121.66| 41| 61| 823| 870| 1
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823- 870 (56.08/51.36) RDQLMFLTYKPSRKTYImsFGVDSPRnFVngSNDVY.QFSNQTYinIHN
887- 928 (65.58/36.49) RDVIHYLVNTTDALTYL..YRSIKPK.FI..STEAFgQISRETI..FHN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 147.72| 46| 59| 611| 657| 6
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611- 657 (72.16/46.04) EP.KEEDIESNINTKLLFkNSSNTPKISHLSSEIKNLILVMDMKVRHL
671- 717 (75.57/44.27) EPiNREKPNDPIKLKINF.IPFLLPKDLQFLNNIKNLLVFCDNRAKLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 328.41| 102| 860| 226| 329| 7
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226- 329 (170.39/113.17) LISTKIPIVIT.DITIRNGTVSLKVNGEYETVLTLLSSDI...............CEKWTLLHIKILVEQHDIGYGT.TLVHPLQLHKVHQHLQKLMNE..SNNPINTmhDFMHKFCLSLQLD
1087- 1207 (158.02/98.43) LPNGTIPCTIHfTVYLEPNTFDLKAKIEYEGSFKPSESEIkmaeeyfekvlsngnCPQGVYSFINILRLTYPMSFANlTLLMELEMKPPSNHYYRLSLDlvSNDHRNS..DQTVQYSPSFLID
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 106.42| 34| 553| 407| 444| 8
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407- 444 (46.21/45.55) DTNTGRLSlntLIGTTTAIRAKEKlQILRKKLNKINPI
966- 999 (60.22/43.62) DCSYGEPS...LIGLQNFLKVQTQ.NVTSKSLNQMNPV
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