<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04248

Description Uncharacterized protein
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
Length1454
PositionTail
OrganismGeotrichum candidum (Oospora lactis) (Dipodascus geotrichum)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Dipodascaceae> Geotrichum.
Aromaticity0.04
Grand average of hydropathy-1.291
Instability index89.30
Isoelectric point9.88
Molecular weight159130.42
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04248
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.59|      18|      18|     624|     641|       1
---------------------------------------------------------------------------
  123-  140 (43.78/ 7.43)	QQQQQQQQQQQQQQQQQQ
  840-  857 (41.81/ 6.64)	QQQQQQQQQQQLQPQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|    1284.90|     232|     849|     110|     369|       3
---------------------------------------------------------------------------
  112-  369 (401.57/61.57)	..RQR........QQQQQIGqqqqqqqqqqqqqqqqqqqQQQQHQQ.QQQQQQQQQQQQQQQQQ..................QQQQQQQQQQQQQQQRSNMINPNNQFQQNANsgnnidgfnQQNQIRQLQQ...EQQQQQ...................P.........STI...K...KPEMYQNNNAQ..FNMGNQQQQPLQQPSQHSIQQH..PSQQ.QFNANNLGNMSREQQILLMKMAEAKQNQ..LNSNNNANGNNNTNNP.NLA...MGNTSSAPN.....VSPNLNPSR....N.ETANKTANGNPVPSKEAE.....FRKQ..LQKQL.................LSSTIPPQILQMMP
  399-  563 (259.40/32.70)	KQAYE........RHYAFIV.....................HLHRQ.QQVQRQQQLQLQQQQQQ..................QQQQQQQQQQQQQQQ...LPQP.............................................................................................TQTQQQQQQVPLH...QP..PSQQpKFRSPQVPNQGLSQQV......PGRNNQ..RIINNNANDGLN.NSP.QFAaqnITNENTLYN.....IG.NQQP.R....F.EGANPRL..SPVMSQQ........RPQpvGNKHN.................MINIQPPQ......
  564-  781 (226.98/27.10)	............................................QQ.QQNQPSSQPSLSQFQPP..................GPPSIPSQQPQQQPQQS...QP....QQ.............QSSLLPQQQglpPQQAAQpvqpvqpvqpvqpvqppqpP.........QPV...Q...PVQPVQ..........SVQPVQPPQPPPQQPPQQPqlPQQP.Q.........SQKQRGLLGNLPPDQLEQ..L.RNLKIQAEKNIVLP.DL...................TDKLSPEQ....KlQTSNILKMTLPSYQKIDQyliiyFMLN..LNKQLvvklfqikaifrqqweaLSN...GRFL.TEP
  800-  942 (120.31/ 8.99)	EQFQKkkmgekklQEQQ......................HQLQGQQlQQQQQQHQFQQQQLQ..qqqqqqqqqqqlqpqqqqQQHLQPQQQQQQAPNTS...QPSKPLQQPPS.............VQQGPQ....AQKPA...................P.........SPVpakK...APPKKQGKQTQ..AQIKKQQQLAAQLKLQQEQQQQ..QQQQ.Q..................................................................................................................................................
  997- 1218 (276.64/35.57)	.......................................QQQQQQQ.QQQQQQQQQQQQQQQQQ..................QLQQQQLQQQQQQLQQQQL.....QQQQKQQ.........QQQQQQQLQK....QNQQH...................PlnetndsknVTI...SkdaKPLSQSENSLQsnFTAGNSS....GDNQAHS........EQ.KL.......LSQPQQPTPPPAAPAKKKRasVSKGKAAMASNNVNSPkSFA...SYPDSLSPSgvpkyAKPGLTADQlklpN.SRKRKPSSATPTPTSPED.....IRTP...QQPV.................PSSQTPTGMGSSTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.32|      14|      16|    1346|    1359|       4
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 1346- 1359 (24.12/17.70)	RNAFG.SLDTVKSSN
 1363- 1377 (18.20/11.51)	RASVSpSLANVNSAN
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.15|      16|      16|    1272|    1287|       5
---------------------------------------------------------------------------
 1272- 1287 (25.02/21.05)	EVESVIGKRSAIGKDS
 1289- 1304 (26.14/22.42)	KIKLPMTKPNAVTKPS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04248 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DSSKIKLPMTKPNAVTKPSQVNQSSTPYPA
2) QQQQQQQLQPQQQQQQHLQPQQQQQQAPNTSQPSKPLQQPPSVQQGPQAQKPAPSPVPAKKAPPKKQGKQTQAQIKKQQ
3) QQQQQQQQQLQKQNQQHPLNETNDSKNVTISKDAKPLSQSENSLQSNFTAGNSSGDNQAHSEQKLLSQPQQPTPPPAAPAKKKRASVSKGKAAMASNNVNSPKSFASYPDSLSPSGVPKYAKPGLTADQLKLPNSRKRKPSSATPTPTSPEDIRTPQQPVPSSQTPTGMGSSTPTASSPALARRESAEVAKNKLIT
4) QQQQQQQQQQRSNMINPNNQFQQNANSGNNIDGFNQQNQIRQLQQEQQQQQPSTIKKPEMYQNNNAQFNMGNQQQQPLQQPSQHSIQQHPSQQQFNANNLGNMSREQQILLMKMAEAKQNQLNSNNNANGNNNTNNPNLAMGNTSSAPNVSPNLNPSRNETANKTANGNPVPSKEAEFRKQLQKQLLSSTIPPQILQMMPGLPPDVNTWIQINELKN
5) QRQQQLQLQQQQQQQQQQQQQQQQQQQQQLPQPTQTQQQQQQVPLHQPPSQQPKFRSPQVPNQGLSQQVPGRNNQRIINNNANDGLNNSPQFAAQNITNENTLYNIGNQQPRFEGANPRLSPVMSQQRPQPVGNKHNMINIQPPQQQQQNQPSSQPSLSQFQPPGPPSIPSQQPQQQPQQSQPQQQSSLLPQQQGLPPQQAAQPVQPVQPVQPVQPVQPPQPPQPVQPVQPVQSVQPVQPPQPPPQQPPQQPQLPQQPQSQKQRGLLGNLPPDQLEQLR
6) TKMKSEAIPQVASKYESNIFTSTSTKAQYHAKFQETV
7) XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
1286
844
1045
170
419
65
945
1315
922
1240
386
697
101
994










Molecular Recognition Features






MoRF SequenceStartStop




1) FKQIVDLS
2) KERGYVASEVFQIESS
3) KKVNPKAEKLLDAILQES
4) LVRSAEELMFVTRSLKEAWILGQIKPLRNEEEQQQQQEGDGLTED
5) VNDREQ
28
40
115
59
106
35
55
132
103
111