Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSALQGQRPPAGAQPGQSSAAGPSASAPSGPLHEQPQPVASSSRNPQLGPHPYFRYPTPTPDQIEEELPPYWEDENVPLGPLLDRLARKSYSDMRTLVEKTLPPLAPRQKPKHVIEYAKTTRQAVLKYLAVLRWKMSVDLATTTQPHANGLPAAAAFPTPHSNGESNNTSPVAFPSKGKGRVDGTAEEPVVRGKVTDARRIQHFLEHQNQQQEAAITHIRHVTGMIDMLRERNADLLTALSLQSTGTYSRLPAQLMEDWVPRAPLQPPAVLANIERLNEHTRYRLRCVDYVPPDLVVERVADGRVYARGGGENGWIAQLSLEGFEEDSKWWLCGFEWAWKVDGAESPKPFSTPELNQILAMCNHEVLAPQEGEGDNVDEGDANADKAKVDAPLVRVYNFLQHLSLAYQLEVLYSQALAMTQGRWRGQLQVEIDRTKKELRLRYWIRQRTQAPPVAAPGVKRPPQAPTVSSVNNQRPMVGGTLTFTLAEATSPMSEAERVLREVAVCGAEPADRTVRFELGIKWEVGEAGTGGGLKAGEAMDASGLKIDPSSLSMKGIVTAATRAHAAHLSRVNTTPLLTNERLILDPLNPPRMEESESSSTRPVSLVVPLPSRGQLSIAVSSISGLLEIEDSIARDNGQVMENNRTLRAKLATNSSNEQKTRLADDVYRLVSAIIVEDIEDNLRQLGLHPLRRVALRTNDLSKTDLHPSTTVFVPLPVSQNHYFVAKVTTKGIAYELLKLLRVPMEGNGGMKMSVGERIPIDLAKLVERRAAKGAKRNLDGEETSADMAMLKWESAAGKSGPFQVHARDLRDMFTYCNALVAQTMVEQQLKDRGIPYTAQFPDEDDFAVPRSRSALAGMVPNLCVNASHLFKDGRAAEVASPKVFLVIKNWWSGSQCNVETIVRLRHQPSLDSQPAAPVARASDAGRAEGITFDQNTLTVRFHAPSIARCVPDFLEQWERLSKVIVVAGEVNRLNKQEEFRDIRMLSFDLCTASVQYAPGFNVAITYTPTSDSYEASFSRTAVHGATPALGGPHSDGGDNPHAALAPLLSAHLNELTQLAPVGGRGHAGRDFLQLLRATLPLLLEAEALRVASASPYPALVVRSVMEYRLVWDHEAKTPARYALDVLLTQAGSARFLLCDATRRKDVPEDLTCGPLTPIPNIANAMLKGFQAAKIAKVSTPSGPAGTPRTPNPKTPGKGITPKEARVKTITPVMPPAARLDGGESMICSLGVMHEVLRAISNEIEISIGGVPMGPGSARG |
Length | 1260 |
Position | Tail |
Organism | Cutaneotrichosporon oleaginosum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Tremellomycetes> Trichosporonales> Trichosporonaceae> Cutaneotrichosporon. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.330 |
Instability index | 43.27 |
Isoelectric point | 7.65 |
Molecular weight | 137335.78 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP04193 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 569.37| 184| 656| 47| 403| 1 --------------------------------------------------------------------------- 90- 293 (296.83/352.62) SYsDMRTLVEKTLPPLAPRQKPKHVIEYAKTTRQAVLKYlavlrW.KMSVDLATTTQPHANGLPAAAAFPT.....PHSNGE.....SNNTSPVAFPSKGKGRVDGTAEEPvvrgkvtDARRIQHFLEHQNQQQEAA......ITHIRHVTGM.IDMLRERNADLLTALSLQSTGTYSRLPAQ..LMEDWVPRAPLQPPavlanieRLNEHTRYRLRCVDYVPP 406- 609 (272.54/104.20) AY.QLEVLYSQALAMTQGRWRGQLQVEIDRTKKELRLRY.....WiRQRTQAPPVAAPGVKRPPQAPTVSSvnnqrPMVGGTltftlAEATSPMSEAERVLREVAVCGAEP.......ADRTVRFELGIKWEVGEAGtggglkAGEAMDASGLkIDPSSLSMKGIVTAATRAHAAHLSRVNTTplLTNERLILDPLNPP.......RMEESESSSTRPVSLVVP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 150.04| 46| 162| 825| 874| 2 --------------------------------------------------------------------------- 825- 874 (72.17/47.31) MVEQQLKDRGIPYTAQF.......PDEDDFAVPRSRSALAGMVPNLcvNASHlfKDG 985- 1037 (77.87/39.90) MLSFDLCTASVQYAPGFnvaitytPTSDSYEASFSRTAVHGATPAL..GGPH..SDG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 201.80| 52| 1150| 16| 70| 5 --------------------------------------------------------------------------- 16- 70 (94.50/54.04) GQSSAAGPSASAPSGPlheQPQPVASSSRNPQLGPHP.YFRYPTPTPDQIEEELPP 685- 708 (26.17/ 6.99) ...............................QLGLHP.LRRVALRTNDLSKTDLHP 1169- 1216 (81.12/39.87) GFQAAKIAKVSTPSGP...AGTPRTPNPKTPGKGITPkEARVKTITP.....VMPP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 193.00| 62| 559| 330| 402| 6 --------------------------------------------------------------------------- 330- 402 (95.32/94.64) WW...LCGFEWAWKVdgAESPKPFSTPelNQILAMcnhevlAPQEGEGDNVDEgDANADKAKVDAP.LVR.VYNFLQH 891- 957 (97.68/64.64) WWsgsQCNVETIVRL..RHQPSLDSQP..AAPVAR......ASDAGRAEGITF.DQNTLTVRFHAPsIARcVPDFLEQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 71.86| 23| 24| 750| 772| 7 --------------------------------------------------------------------------- 750- 772 (38.70/20.94) GMKMSV.GERIPIDLAKLVERRAA 774- 797 (33.15/17.00) GAKRNLdGEETSADMAMLKWESAA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LGPHPYFRYPTPT 2) QIEEELPPYW | 48 63 | 60 72 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab