<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04174

Description Uncharacterized protein
SequenceMSSSTTSEAKNGPEVVMKDDGGDDSSPDSTPLAAGRSLPATASNNEKTAEKDNESTPKAQENKNGEEEKAKETKDQEDAPQPPAEPPSKSTTLARQIQELTSLRRRIMALRDVPGRLITLQSPMRSAFDSSGHPDGIQDTGLMLNDALSTSGTVTTQPGGDETIDSIISSAVNISRPQNPSSLVRSAFQAMEEARKQMLGDLVQGAMKDADLSCASDKSDINSSNKRERKKRKTVLAESPAPFPSLQAQTTIVFPPDAENHRTPFTYNDLLPYLRQKNRGSDRGGLGIKLSIWAKSKASPYTPQVSEPLTLRVKIQDVVTMFLKMTYRSVDHDPIVIESVVAFGPREKQKSPYSHSDFSVYEKMTQSILKMIEQEPNVSFPQMIDYISSFESLFDARCSVCERILSQEGHVPPVARVWTDMSGGRRRWDPRHVSCMHA
Length438
PositionTail
OrganismSchizopora paradoxa
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Hymenochaetales> Schizoporaceae> Schizopora.
Aromaticity0.05
Grand average of hydropathy-0.695
Instability index69.82
Isoelectric point6.07
Molecular weight48242.57
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04174
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.70|      33|     201|     162|     195|       1
---------------------------------------------------------------------------
  119-  155 (46.26/23.98)	TLQSPMRSAFDSSgHPdgiQDTGLMLNDALSTSGTVT
  163-  195 (53.44/29.69)	TIDSIISSAVNIS.RP...QNPSSLVRSAFQAMEEAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.02|      41|     212|      26|      67|       3
---------------------------------------------------------------------------
   26-   67 (64.77/45.48)	SPDSTP.LAAGRSL..PATAsNNEKTAEKDNESTPKAQENKNGEE
  239-  282 (66.25/42.06)	SPAPFPsLQAQTTIvfPPDA.ENHRTPFTYNDLLPYLRQKNRGSD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04174 with Med27 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSSSTTSEAKNGPEVVMKDDGGDDSSPDSTPLAAGRSLPATASNNEKTAEKDNESTPKAQENKNGEEEKAKETKDQEDAPQPPAEPPSKSTTLARQIQELTSLRRRIMALRDVPGRLITLQSPMRSAFDSSGHPDGIQDTGLMLNDALSTSGTVTTQPGGDETIDSIISSAVNISR
1
176










Molecular Recognition Features






MoRF SequenceStartStop




1) TPLAAGRSLPA
30
40