Description | Uncharacterized protein |
Sequence | MSPPRRRSARLASASTPKPKKVSQLSSLTERDETPEEVESTSLDGVVASPHPQPATPASSALKPPMSEMHPSKVHPTATGSSETWLGFRDIKSANVARGKSAMNPQATPSRLSGVPSSSFTFNLTGPAGETGLSTDAQRMMADLREEAAKIKADLVAKRELEKLDEQVNGRKIARAKGKSGRFSAAHMEEFKKMDSIEGHASAFRAQPGRFTPVKKSLKRTSSKANLEDTPKSTLHRSPSKNNLQSTPSQAVSGLKCTSSKANLDEHIEKQPLGTTPSKLRVFAPQPQPSPSPVKRVRQQIEDDASSRRPISRDGSSLPRPTSSSNASASLARSGSTLTSSTSPAKATAARTGLPKISQPALTKSPSKASLSGLTQSTSKTDLGELTKSPSKPALGGTAKPAATHDLATLSRTVELKRRIVSPGRFERVKSILRGGKSPAQPAKSAIPQPFTGVSQTPGPRILDKPLPAVPFTTPRRKLFKRVDFTPDSKDTPSKSRGEVNYPNLDAILSRMNEPESHGAPREIKSPLPASPNKREGQAPEVPTVPGAFTFRSDRTARFGTGSPAGFGSSPGQLSVRQVRASITPVEEMPGSFPETADLPRATHTSKTPVKSMTAGIKHGLTNEKRARTNTEPFVLNKEGSTPAKLVFEGVPHGLPNEKRARTHVEPSHPNKENKSPVKILTGVAHGLANKKRARATEDDEPDVDQEGADRGGKRRKAELAPQPRILGTPKLARSTPIPSPQKVSAGTPSPVCGEIVMRGEDCVSLGWCFWHRACYGCLLCGSKHIASGVKLEELFGDMDDDLEDNMGKTRGREIEEPPLCAHCLVEAELDGMDERAVVQKGLRRMDCVDGGLGRTRWEASQGQPLPLRIGSHQTGAPVPESPAYRSPSLRATGQRSSITNHDRNQQRDAIDAIDPPDSTIYVSINDPLGEPAFKPSPTKPIPRWMQMLLGNRRQYYPDASRQSTPVSPSRVSSTSTQQLGPLPERARTSSSISTVCPQKILNPASTPPSLSPRVSSLTRTSSGGSITDFYRRTVEDHMKRHTPSSWVSHEPLKRPSSRMAYIQGHQRTVTEVSTSSAYATPPEFSFEEHNEIATLPCRPQPGLAGTMPSRHVAFDELPAQLTRTRHPLSAPAVPSSHKHDILTTLIDRMLSRCRRPHLPLRPIIVASRLTARSSIAPLSTIVFHQSRALLVTLATIEAQNHLQRLGTKDHQLPVANKSTAATMAPVENNPQELLEQQLKDTIQDLYQIMLQITMYTTTPTHSSHTALTSSLQTLSASLQAVHTTAVAGAPPTPDGVPPNAQDQLGMPPGVPLHDPARHVTPGALPNIPPELVQYVENGRNPDIYSREFVELVRRGNQLMRGKMGAFAQLRDVLAGEMRSAMPEFPDKFVLFVMATLHVVS |
Length | 1401 |
Position | Middle |
Organism | Verticillium longisporum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Glomerellales> Plectosphaerellaceae> Verticillium. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.617 |
Instability index | 64.16 |
Isoelectric point | 9.88 |
Molecular weight | 151522.94 |
Publications |
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP04140 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 1314.04| 212| 213| 410| 621| 1 --------------------------------------------------------------------------- 3- 210 (175.77/52.68) ................P.P.RRRSARLASA...STPK.PKKVSQL.SSLTERDETPE....EVESTSLDGVVASPHPQPATPASSALKP.PMsEMHPSKVHPT...ATgSSET..........WLG...FRDIKS.ANVA..RGKSAmNPQATPSRLS....GVPSS...SFTFNL.TGPAGE......TglstdaqrmmADL..................................REE..AAKIKADL..............vakrelekldeqvNGR..KIAR..AKGKSGR..FsaahmEEFKKMdsI....EGHASAfrAQPGR 246- 444 (239.97/74.37) STPS.QAV.SGLKCT.SSK.ANLDEHIEKQP.LGTTP.SKL..RV..FAPQPQPSPSPVKRVRQQIEDDASSRRPISRDGSSLPRPTSS.SN.ASASLARSGS...TL.TSST..........SPAKAT..AART.GLPK..ISQPA..LTKSPSKASL..SGLTQSTskTDLGEL.TKS.PS......K..........................PALGGTAK........................PA....................athdlatLSRTVELKR..RIVSPGR..F.....ERVKSI..L....RGGKSP..AQPAK 445- 662 (322.82/102.37) SAIP.QPF.TGVSQT.PGP.RILDKPLPAVP.FTTPR.RKLFKRV.DFTPDSKDTPSKSRGEVNYPNLDAILSRMNEPESHGAPREIKS.PL.PASPNKREGQ...AP.EVPT..........VPGAFTFRSDRT.ARFG..TGSPA.GFGSSPGQLSV..RQVRASI..TPVEEM.PGSFPE......T..........ADL.............PRATHTSKTP..........VKSM..TAGIKHGL...................tnekrartNTEPFVLNK..EGSTPAKlvF.....EGVPHG..L....PNEK......RAR 663- 864 (179.91/54.07) THV..EPS.HPNKEN.KSPvKIL....TGVA.HGLAN.KKRARATeDDEPDV.DQEGADRGG...KRRKAELA..PQPRILGTPKLARStPI.P.SPQKVSAG...TP.S.P...........VCGEIVMRGEDC.VSLGwcFWHRA.CYGC...LLCG..SKHIASG..VKLEEL.FGDMDD..................DL.......ednmgkTRGREIEEPPlcahclveaeLDGMdeRAVVQKGL..................rrmdcvdggLGRT....R..WEASQGQ.................................. 865- 1084 (215.56/66.12) ...P.LPLrIGSHQT..G......APVPESPaYRSPSlRATGQRS.SITNHDRNQQRDAIDAIDPPD.STIYVSINDP..LGEP.AFK..PS.PTKPIPRWMQmllGN.RRQY..........YPDASRQSTPVSpSRVS..STSTQ.QLGPLPERART..SSSISTV..CPQKILnPASTPP......S..........LS..............PRVSSLTRTS..........SGGS..ITDFYRRT.........vedhmkrhtpsswvshepLKRPS..SR..MAYIQGH..Q.....RTVTEV.......STSSAY..ATPPE 1094- 1342 (180.01/54.11) ATLPcRPQ.PGLAGTmPSR.HVAFDELPA.Q.LTRTR.HPL.........SAPAVPSSHKHDILTTLIDRMLSRCRRPHLPLRPIIVAS.RL.TA....RSSI...AP..LSTivfhqsrallVTLATIEAQNHL.QRLG..T.........KDHQLPVanKSTAATM..APVENN.PQELLEqqlkdtI..........QDLyqimlqitmytttP..THSSHTA..........LTSS..LQTLSASLqavhttavagapptpdgvppnaqdqlgMPPGVPLHDpaRHVTPGA..L.....PNIPPE..LvqyvENGRNP....... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 47.40| 14| 15| 212| 226| 2 --------------------------------------------------------------------------- 212- 226 (20.38/16.16) TPvKKSLKRTSSKAN 230- 243 (27.03/16.86) TP.KSTLHRSPSKNN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 46.58| 15| 17| 1351| 1367| 3 --------------------------------------------------------------------------- 1351- 1367 (23.64/22.28) EL..VRRGNqlMRGKMGAF 1369- 1385 (22.93/13.78) QLrdVLAGE..MRSAMPEF --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ETWLGFRDIK 2) MSPPRRRSARLASASTPKPKKVSQLSSL 3) PSKLRVFAP 4) RFERVKSILRGGK 5) VPFTTPRRKLFKRVDFTPD | 83 1 277 425 470 | 92 28 285 437 488 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab