<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04054
Description |
Uncharacterized protein |
Sequence | MPLMLDNAVPVDLNDVDDLFGDGVGLSLPDRSHDRPLSLKVDDVRSRGCCQTIAWSKSGTVASITPDGQFLQLRFLRCNPADGTWDLSKPTTCELIKGSSGIPLVHLEWGSTNLPELAIVDAVGRVVIVGFSISLNHPFITRKYDTDSIDDANAVVGAHWLAVAPQNQQKSYNILYGPAIRNGNIYQYESSFVHAGGPSHPHSSKSALFCVTISGMLKMFWSQNNNRMEETTMELESVNSLDELVTHAALASDKRFLLVAVATSSKQLRLLKIEIQWGGPGSQPDKNPLPQNARLSPSLVEKHLAATTWLQTGPGDDASMAELSHLHVLPSIIDNTGKSTVSPMIVAIRTRTPTSGSYQTAQTIIDRWEAVSEQRHNLHPAFEQLGNRRNSEVSEQTGYTRLRKLEPITINKVLISFQPAQFGKLLVLTMSDGTVEYRDRFTFEEVYATEDTNRVMSLRQVGWNFSEEGSCQQVAFSPTHCSMVQMSDEGKIKWCKLQYPLGDIGNSYQEVRYGATIAGLTVAAASALWHQANYDDLLAIVAPYTSKRRFIHDWITEIIKVHKIQVDYSEELHHDLLMRNTPLQSCLSFMNSLGFKGETHPRTFQGKFAMIDLNVRNVVVLITLAMNTPVTVREKMTPLDEHEVVEALAGCAKWSLDLLSWLTDSLFTLMNDSEFIARLEPKRFGEVTPYLQKRNDVSLHLLLSSSSRSFLICVCRRIVHLESLSERAIEFYRGQSANMDQTGVPKAANPKLQQAYQKMQHITTTSLVKVADFEKLLNVLGGDVRQAYQAFLPNMVKSSSQNPQGKQIDLAVKAAQVSLELNMLLAAGPPAPFLPVIKKFFTKELPAFRALCDPSKLFFANYDLLGVQDDESSLARNGSRFVYVDLFKRVEMKLGAQQWRRCTRCACVMEDVFGSRPGYSFVLGQQRKCACGGLWALLPKGKLML |
Length | 945 |
Position | Tail |
Organism | Trichoderma harzianum (Hypocrea lixii) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Hypocreomycetidae> Hypocreales> Hypocreaceae> Trichoderma.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.177 |
Instability index | 41.33 |
Isoelectric point | 7.09 |
Molecular weight | 105340.46 |
Publications | PubMed=26067977
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP04054
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 425.10| 135| 194| 584| 735| 1
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584- 735 (198.15/143.20) QSCLSFMNSLGFKGETHPrtfQGKfaMIDLNVRNVVVLITLAM....NTPVTVREKMTPLDEHEVVEALAGCAKWSLDLLSWltdSLFTLMNDSEFIARlEPKRFGEVTpyLQKRNDVSLHlllSSSSRSFLICVCrriVHLESLSER.AIEFYRGQ
786- 925 (226.96/121.88) QAYQAFLPNMVKSSSQNP...QGK..QIDLAVKAAQVSLELNMllaaGPPAPFLPVIKKFFTKELPAFRALCDPSKLFFANY...DLLGVQDDESSLAR.NGSRFVYVD..LFKRVEMKLG...AQQWRRCTRCAC...VMEDVFGSRpGYSFVLGQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 117.96| 38| 194| 72| 112| 2
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72- 112 (65.74/53.25) QLRFLRcnpADGTW..DLSKPTTCELIKGSSGIP.LV..HL...EWGST
267- 312 (52.22/32.73) QLRLLK...IEIQWggPGSQPDKNPLPQNARLSPsLVekHLaatTWLQT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 181.74| 60| 207| 119| 185| 3
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119- 185 (83.45/70.93) IVDAVGRVVIVGFSISLNhpfiTRKYDTDSIDDANAVVGaHWLAVAPQ..NQQKSYNILyGPAiRNGNI
332- 393 (98.29/58.45) IIDNTGKSTVSPMIVAIR....TRTPTSGSYQTAQTIID.RWEAVSEQrhNLHPAFEQL.GNR.RNSEV
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