<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04041
Description |
Putative RNA polymerase II transcription mediator complex subunit Srb7 |
Sequence | MADILTQLQTCLDQLATQFYATLGYLTTYHDNSPATPPPNIPDAAPPLARIQKNSTNPPIPAGAATVVASQQASPPPAPGAVPSVGVPGTATGGGADEGIVDPSLPPRPDSPRTFASRQRELARDLVIKEQQIEYLISVLPGIGSSEAQQEKRIRELEGELRLVEEERETKIKDLRRLRRRLEDVLGAVEVGIYGRR |
Length | 197 |
Position | Middle |
Organism | Aspergillus rambellii |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
|
Aromaticity | 0.04 |
Grand average of hydropathy | -0.435 |
Instability index | 67.32 |
Isoelectric point | 5.34 |
Molecular weight | 21260.79 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 ARBA:ARBA00003669
ECO:0000256 RuleBase:RU366036
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP04041
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 34.65| 9| 17| 36| 45| 2
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36- 45 (15.35/10.44) TPPPnIPDAA
56- 64 (19.30/ 8.60) TNPP.IPAGA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 106.52| 32| 32| 106| 137| 3
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106- 137 (54.96/28.76) PPRPDSPRTFASRQRELARDLVIKEQQIEYLI
141- 172 (51.56/26.63) PGIGSSEAQQEKRIRELEGELRLVEEERETKI
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