<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP04002

Description Uncharacterized protein (Fragment)
SequenceMSDQLRPSGYFYSDAEDPFAGAFWSQFEDPHDLAARHIPHDASPGAAMKAYREYRDRVRKPVLATYTILGFLSSGTYGRVYKARLRNPPLLVAGGSGGSGGGGGGIGGMGGANGGAGSAKGAAGGGGGGGNGSTAKKRGGLLQQHQLLDSPSAASSLHATPKSAVEGGGAGGGHGTPTASPSLNASLGGGASTTNVSGRVDSNLQGNSIPDNQIYAIKKFKPDTKETVTTIYTGISQSAMREISLNRELSHVNIVTLHQVMLEDKAIYMVFEYAEHDLLQIIHYHSTALRAPIPTAVLKSLLWQLINGVAYLHANWILHRDLKPANILVTSQGVVKIGDLGLARLYSSPLQSLYNGDKVVVTIWYRAPELLLGARHYTTAIDMWSVGCIWGELLALRPMFKGEEAKMDPKTKAAPFQTDQLKRIVEVLGTPNKDRWPSIESMPDYKGWWPHLRLDNYPKTLARWYATRNKTDEGYDLFDSLLQYDPEQRLTANQALKHGWFVEQEPKPTSNAFSSLPKPNATYPNRRVIQDDMDPKMKSNYQPPIETHHLQPVQYRLDGNQHRLAQLLHQQEQVRHQQMQMQQQRGGGNPSQTPTVGGPAAPAPIT
Length606
PositionKinase
OrganismSporisorium scitamineum
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Ustilaginomycetes> Ustilaginales> Ustilaginaceae> Sporisorium.
Aromaticity0.08
Grand average of hydropathy-0.480
Instability index47.73
Isoelectric point9.19
Molecular weight65992.71
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP04002
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      98.12|      15|      15|     110|     124|       2
---------------------------------------------------------------------------
  110-  124 (25.05/11.04)	GGANGGAGSAKGAAG
  126-  140 (24.87/10.91)	GGGGGNGSTAKKRGG
  168-  182 (27.26/12.69)	GGAGGGHGTPTASPS
  184-  198 (20.95/ 7.99)	NASLGGGASTTNVSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.05|      28|      46|     390|     418|       3
---------------------------------------------------------------------------
  390-  418 (47.80/31.39)	WGELLALrPMFKG..EEAKMD..PKTKAAPFQT
  436-  467 (46.25/25.87)	WPSIESM.PDYKGwwPHLRLDnyPKTLARWYAT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.63|      35|     488|       9|      52|       4
---------------------------------------------------------------------------
    9-   44 (61.82/48.42)	GYFYSDAEDPFAGAFwSQFEDPHDL..AARHIPHDASP
  499-  535 (60.81/28.05)	GWFVEQEPKPTSNAF.SSLPKPNATypNRRVIQDDMDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.91|      32|     262|      54|      90|       7
---------------------------------------------------------------------------
   54-   90 (48.24/43.27)	YRDrvRKPVLATYTILGFLSSGTYGrvyKARLRNPPL
  319-  350 (55.67/34.42)	HRD..LKPANILVTSQGVVKIGDLG...LARLYSSPL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP04002 with CDK8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGGGGIGGMGGANGGAGSAKGAAGGGGGGGNGSTAKKRGGLLQQHQLLDSPSAASSLHATPKSAVEGGGAGGGHGTPTASPSLNASLGGGAS
2) PKPTSNAFSSLPKPNATYPNRRVIQDDMDPKMKSNYQPPIETHHLQPVQYRLDGNQHRLAQLLHQQEQVRHQQMQMQQQRGGGNPSQTPTVGGPAAPAPIT
101
506
192
606










Molecular Recognition Features






MoRF SequenceStartStop




1) LRPSGYFYSDA
5
15