<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03995
Description |
"Related to SSN8-DNA-directed RNA polymerase II holoenzyme and SRB subcomplex subunit, cyclin C homolog" |
Sequence | MSANYWASTQCNNWLLDRPQLELARKEDLQYATRLECAALGVFFSNLLSTMCKRLNLRQRVVASANVFFRRFFSKNSYSALDPFLVCATCVYVAAKVEESPIHIKSAVAEATRTFQEVGFRGLPGDNSSLAEMEFYLVEEMEFDMIVYHAYRSLIGLYDAYGAKESNSGGGMGMEVEAFGVIKAGAEEQQASLGLSSSDQTDVRLVEFDEQVLQLSWFVLNDTYKTDIPLMYPPYMVALASLWLALSLHTPASEKITASMQNRQHKRQQTDPELDQLLNEPKSTPAGFNSLSSASQLEEAAPPSQEALTFFASLNVSLPLLAEVVQQMVSGYTVQKQVSALVNDGAGMVKLLERMREARRLDLIHKANNAGATDTRRPNR |
Length | 380 |
Position | Kinase |
Organism | Sporisorium scitamineum |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina>
Ustilaginomycetes> Ustilaginales> Ustilaginaceae> Sporisorium.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.177 |
Instability index | 47.04 |
Isoelectric point | 5.25 |
Molecular weight | 42319.61 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | cyclin-dependent protein serine/threonine kinase regulator activity GO:0016538 IEA:InterPro
DNA-directed 5'-3' RNA polymerase activity GO:0003899 IEA:UniProtKB-KW
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03995
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.35| 12| 23| 38| 49| 1
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38- 49 (20.32/12.88) AALGVFFSNLLS
63- 74 (22.03/14.53) ASANVFFRRFFS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.81| 22| 23| 195| 217| 2
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195- 217 (32.77/29.45) LSSSDQTDVRLVeFDEQVLQLS..W
220- 243 (37.04/27.81) LNDTYKTDIPLM.YPPYMVALAslW
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