<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03926

Description Uncharacterized protein
SequenceMDVPENLQPWTDNTTRFEADLEMVQALANPRYLEYLAHRGFFEDPAFLNYLQYLEYFQKVEYSKFLTYPNCLQFLTLLKQPKFRDALKNPAKVNEINDALFFNYNNRYQAEEDGVKMEDVEDGVVCHPLRNLRVPIAIAHSRIKLLSHPTQRQFGLPVTNMNCGLSPHHRSVPDCQVQISRQLLRANQVSSELEVYTCQRRPSIPNQPLYSSIPEITEMSADKKQSSFLVDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKQGRLDKRYAGISECFSRTAKDEGVISLWRGNTANVIRYFPTQALNFAFKDYFKKMFGFKKERDGYWPWFFGNLASGGAAGASSLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYKKTLATDGLAGLYRGFGPSVAGIIVYRGLYFGLYDSIKPVVLTGNLEGNFAASFALGWAVTTLSGVASYPLDTVRRRMMMTSGEAVKYKSSVHAFQSIVAAEGFKSLFKGAGANILRGVAGAGVLPSNKRSAKRKSVGEFVRWSNSQNICGSTDIFVPYHLKSSFGKRVPSSSAAAPGVGAMCALCYVRYPVQAMYAALQRRNGYQTEFPSLRAQPQQTAYTPRSSPSPLEGQHRIHLSTFFLPVYDVLLSSNETRVHVPDRLQSLAAKLPIELVLAIYGHLSPQDIWNCTHVCRLWCHAGIDLLWYRPNIQKTSALLKLMTTLKSPNQTFPYGEFIKRLNLTALAAQLPDEVIDKFSVCTKFERLTLAGSKKVTDEGLKNILLNNRSIMALDIASMELITDKSVELIAETCRGLQGLNMTDCKNITDDAILTLADSCPSLRRIKVSNCVKLGDTSVLKLADKCKNLMEVDLNNCSTISDHAIDTIFRNLPSLREFRIAGCSNITDTAFESLTDGSSPSLRILDLTSCARITDDTISRIVNSAQKLRNLVLAKCPNISDRGCTYIARLGKNLHYLHLGHCSAITDRGAITIAQHCQRIRYLDLACCSQISDNSVQRLAQLPKLRRIGLVKCANVSDRSIEALINRQGENTLERVHMSYCVRLTLTAVLYLVNACNKLTHLSLTGVPSCMRDDLRQFCRPSPPDFNQHQQAVFCVFSGDGVKALRKHLNELYEFHRQQAETLYLQHQGENPEQLALMAAQGAQVMFDGGFHNVDNTGNADNVDNTDDFGEADDNDNDMDEGED
Length1185
PositionMiddle
OrganismSaitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Taphrinomycotina> Taphrinomycotina incertae sedis> Saitoella.
Aromaticity0.09
Grand average of hydropathy-0.230
Instability index40.74
Isoelectric point8.63
Molecular weight132247.71
Publications
PubMed=21914972
PubMed=24646756

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-UniRule
mediator complex	GO:0016592	IEA:InterPro
mitochondrial inner membrane	GO:0005743	IEA:UniProtKB-SubCell

GO - Biological Function
ATP:ADP antiporter activity	GO:0005471	IEA:InterPro
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
F:ATADP antiporter activity	GO:0005471	IEA:InterPro
mitochondrial ADP transmembrane transport	GO:0140021	IEA:InterPro
mitochondrial ATP transmembrane transport	GO:1990544	IEA:InterPro
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03926
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            11|     357.36|      24|      24|     809|     832|       1
---------------------------------------------------------------------------
  783-  806 (32.34/17.41)	ITDKSVELIAE..TCRGLQGLN...MTDC
  809-  832 (39.34/22.78)	ITDDAILTLAD..SCPSLRRIK...VSNC
  835-  858 (33.12/18.01)	LGDTSVLKLAD..KCKNLMEVD...LNNC
  861-  884 (32.78/17.76)	ISDHAIDTIFR..NLPSLREFR...IAGC
  887-  911 (30.73/16.18)	ITDTAFESLTD.gSSPSLRILD...LTSC
  914-  937 (32.35/17.42)	ITDDTISRIVN..SAQKLRNLV...LAKC
  940-  963 (35.55/19.87)	ISDRGCTYIAR..LGKNLHYLH...LGHC
  966-  989 (37.25/21.18)	ITDRGAITIAQ..HCQRIRYLD...LACC
  992- 1014 (33.45/18.26)	ISDNSVQRLAQ...LPKLRRIG...LVKC
 1017- 1042 (25.01/11.80)	VSDRSIEALINrqGENTLERVH...MSYC
 1045- 1071 (25.43/12.13)	LTLTAVLYLVN..ACNKLTHLSltgVPSC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.41|      14|      15|     394|     407|       2
---------------------------------------------------------------------------
  394-  407 (26.44/17.19)	GLYRGFGPSVAGII
  411-  424 (24.97/15.79)	GLYFGLYDSIKPVV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.25|      43|      52|     430|     474|       3
---------------------------------------------------------------------------
  430-  474 (67.41/49.76)	EGnFAASFAlGWAVTTLSGVASYP.LDTVRRRMMMTS.GEAVKYKSS
  485-  529 (65.85/39.68)	EG.FKSLFK.GAGANILRGVAGAGvLPSNKRSAKRKSvGEFVRWSNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     123.07|      30|      53|      21|      50|       4
---------------------------------------------------------------------------
   21-   50 (54.03/36.92)	LEMVQALANPRYLEYL...AHRGFFEDPAFLNY
   54-   68 (25.61/13.35)	LEYFQKV..................EYSKFLTY
   72-  104 (43.43/28.12)	LQFLTLLKQPKFRDALknpAKVNEINDALFFNY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      94.92|      23|      24|     703|     725|       5
---------------------------------------------------------------------------
  649-  679 (25.50/11.58)	LAAKLPielvlaiyghlSPQD...IWN.CTHVCRL..
  703-  725 (38.78/21.14)	LMTTLK...........SPNQ...TFPYGEFIKRLNL
  728-  751 (30.64/15.29)	LAAQL.............PDEvidKFSVCTKFERLTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.11|      17|      26|     128|     153|       6
---------------------------------------------------------------------------
  128-  149 (24.82/19.87)	PLRNLRVPIAIAHSrikllSHP
  157-  173 (32.29/20.71)	PVTNMNCGLSPHHR.....SVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.97|      25|      52|     317|     343|       8
---------------------------------------------------------------------------
  317-  343 (42.65/32.34)	KKmfGFKKERDGYWPWFFGNLASGGAA
  369-  393 (39.32/22.65)	KK..GGERQFNGLVDVYKKTLATDGLA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03926 with Med31 domain of Kingdom Fungi
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