<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03901
Description |
Uncharacterized protein |
Sequence | MAADAIITETGALHVAGVPLVNPSTVVVWEVMPGLGNGIQATAKINATSSLPPSLNPPLWAGFAPLASYLFSLQDYLVSEGAQTKQQAQVDNETTEVASIHCCPVSNFSAYVSPEAAAQSATTTTWGSGVTSVAFDPTRGGSVITVVIVEGQYMSPYDPDEGPSITGWRVQCWESSVQPVVLHPIFGSPANFGGQPPTQTVWSTRVNKSIPPSEDLKNPQSYVPMPTTSDERSSSECSVDRANRLSFDPYDLPNDVRQLAQIVYSAHGGEVAVAFLRGGVHIFSGPNFEQVDSYHVNVGSAIAPPAFSSSGCCLASVWHDTLKDRTILKIIRVLPPAILNAQTKVSSAVWERAIADRFWWSLLAGVDWWDAVGCTQSAAEDGIVSLNSVIALLDVDFHCLPTIQQRQQHCPNLDRIKCRLLEGTNAQDVRALVLDMQARLLLDMLGKGIESALINPSTLLPEPWQASSDMLSSIGPDKMTVDPALLLSIQGYVDAVLDLASHFITRLRRYASFCRTLASHAVGASSGSGNSRNMVTSPTNSSPSPSTNQGNQGGVASTTGSSQMQEWVQGAIAKISNNTDGAANAAPNPISGRSSFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCLLFRRRQSPRIPANAQKSSDSSMQKQHLMNSKTEDNTLAVRSGLGAAKLEDGTTSRGQMVGAKGAEENPVGNKSARIGSGNAGQGYTSDEVKVLFLILVDLCKRTATLQHPLPSSQVGSSNIIIRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELQPPAEEWHRRNMFGGPWSEPDDLGPLDNMRQLKINGSTNRHLSDMEEDGDSSFGIQNLWPRKRRLSERDAAFGLKTSVGLGSFLGVMGSRRDVITAVWKTGLEGEWYKCIRCLRQTCAFAQPGALAPNTSNELEAWWISRWTHACPMCGGTWVKVV |
Length | 956 |
Position | Tail |
Organism | Oryza rufipogon (Brownbeard rice) (Asian wild rice) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
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Aromaticity | 0.07 |
Grand average of hydropathy | -0.163 |
Instability index | 44.49 |
Isoelectric point | 6.02 |
Molecular weight | 103045.40 |
Publications | |
Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP03901
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 162.52| 47| 604| 104| 225| 1
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174- 225 (78.26/119.94) ESSVQPVVLHPIFGSPANFGG........QPPTQTvWSTRVNKSIPPSEdlknPQSYVPM
772- 826 (84.26/21.28) EASLGPHMQNMPRPRGADAAGlllrelelQPPAEE.WHRRNMFGGPWSE....PDDLGPL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 374.29| 101| 114| 502| 604| 2
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48- 112 (55.39/24.35) ........................................TSSLP.PSLNPPLWAGfapLASYL..FSLQDYLvsEGAqtkqQAQVDNETTEVASIHCCPVSNFSAYV.......
502- 604 (168.62/96.26) HFITRLRRYASFC...RTLASHAVGASSGSGNSRNMVTSPTNSSPsPSTNQGNQGG...VASTTGSSQMQEWV..QGA....IAKISNNTDGAANAAPNPISGRSSFMPiSINTG
619- 714 (150.27/78.86) HFLHRLCQLLLFCllfRRRQSPRIPANAQKSSDSSMQKQHLMNSK...TED.NTLA...VRSGLGAAKLED.....GT....TSR..GQMVGAKGAEENPVGNKSARIG.SGNAG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.95| 22| 30| 253| 282| 3
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253- 279 (31.10/37.28) PNdvrqLAQiVYSAH...GGEVA.VAFLRGG
286- 311 (32.85/14.71) PN....FEQ.VDSYHvnvGSAIApPAFSSSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.06| 11| 432| 20| 30| 4
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20- 30 (21.28/10.89) LVNPSTVV..VWE
453- 465 (17.79/ 7.96) LINPSTLLpePWQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 109.68| 32| 808| 114| 147| 7
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114- 147 (50.51/34.94) PEAAAQSATTTT...WGSGVTSVAfdPTRGGSVITVV
922- 956 (59.17/34.57) PGALAPNTSNELeawWISRWTHAC..PMCGGTWVKVV
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