<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03823

Description Uncharacterized protein
SequenceMDGVGLGVHRRWDTSGSGSQYSFRTSVSSVAEISTEVGVEVSPPPPPLAAAADKVFVAVAADVKYGKSALQWALQNLAKDGAKVVIAHVHCPAQMIPMMGAKVHYTKMNTKQVNDYRNKEREKAEEKLDEYLLICRKLKVSCEKLIIEEDDIAKGLTDLVALHGVTKLVMGAAADKHYSRKMNTPKSKTALKILEAADPSCKIWFTCKGHLICTREANTTVPAIPPSPAHTVASTLSSSSISSRMRSMSLHPSESEASSSSGSPRHNLNRSRTEVAKYPSQGSGTAPSQLFGHSDQDVNDQPTRTAMGSIDSWDEFERSQNSCYDSSRNSDTVRVSGSAMQQPMYEPDDDHFVSPRKLENSGDDADIYGRLQEALSETQDLKRETYEESTKQLENLYQKEVMHRKITEEALEKQIQETEETERHCNALYDKLHDVEEQKLMVEQHITEMEAVLKEREDRLHDVEEQKFTVEQRITEMQAVLKEHKDKLHDVEEQKLMVEHRITEIRSVLKEREEKLAESKYLLQVLQADKEKLQQERDAAVSESQDLRLKNKQRISMPGEDLNTEFSSYELEQATRGFDQELKIGEGGFGSVYKGTLRNTTVAIKLLHPHSMQGQPEFDQEIAVLSRVRHPNLVTLIGSCREAFGLVYEFLPKGSLEDRLACLNNTPPLTWQVRTRIIYEMCSALSFLHSNKPHPIVHGDLKPANILLDANFVSKLGDFGICRLLIQTNTGAAAAATTRLYRTTTPKGTFAYMDPEFLTTGELTPRSDVYSLGIIILRLLTGKPPQKIAEVVEDAIESGGLHSILDPSAGSWPFVQANQLAHLGLRCAEMSRRRRPDLATDVWKVVEPLMKAASLTAGRPSFVARPDDSPPPSYFVCPIFQEEMNDPHIAADGFTYEAEAIKGWLDSGHDTSPMTNLTLEHRELIPNRALRSAILEWQQQRQRHQPQEEDDDFTLQLHGLVLLISQRQEAAMDSDGEEYDAMWSARCSVSSSAGSLQDAGDQWDEQSLAAGEDKVFVAVDEDVEHGKSTFLWALQNLSTDGANIVLAHVHSPAQTLSKVHCTRMKPEEISEYLMLAKEEAEKNLDEYALIAKSTGKDMKTDCQKVLIDMDDVAKGLEELITLHGITRLVMGAAADQHYSEEMKEPNSKIALKLMETASPSCKIWFTCNGHLICTREPNENLLAIYVPPAQSNTHFKPNEFDRAEERSTKLRRIYFKIIGSIGNETGYGSLRTDDAISIPEATTLAAIVDDTNKQRSVMHSPQESDSVNFSSPACDPQQEEEEPNLDEDMHDILNEACTRAELLKKEVDGESSKRRKAEMDLLIALQRVQESEKSYLQEVNQRKETERTLARQRLEIDEMKRRHNTLYDELQDTKKQKLLLEQHISEIKSAAKDYVQEITEYFIQESCEEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYHELKDVKEQKLCLERLDSSKETKRRRKAESEMLSALKKVHDLEHQYLNELKRREAVEETFARQKEEIQETKRELNKIRSRHMTEIKAHEEKLAESIRFIQKIQAKYDKTLHERDTAIAESEKLRQMNRDGASMIATTQIADFSFFELRQATQDFDTALKIGTGRFMNVYKGFIRNTAITVMLLHPQGLQGQLEFHQEVVVLSRLRHPNVMMLIGACPEAFGMVYEFLPNGSLEDQLSCKKNTPPLTWKMRTRIIGEICSALTFIHSQKPHPVVHGNLNPMNILLDANFVSKLHVCQLLRKYNTGNNTSGTSSYIDPEFLSTGELAPRCDVYSFGIIILHLLTGKSPQNITTIVEDAMEKRQLHSIMDTSAGSWPFVQANQLAHLGLRCANLSGRHRPDLTGEVWGVIKPLLKDASQNFGCKQAFEALSDDTQAPSYFICPILQEVMTDPHIAADGYTYEANAIRNWLDGGNARSPMTNLSLENRELTPNRVLRSAILEWRQHRR
Length1970
PositionTail
OrganismOryza rufipogon (Brownbeard rice) (Asian wild rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.583
Instability index50.50
Isoelectric point5.71
Molecular weight223089.03
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats
>MDP03823
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     327.97|      39|      54|     430|     468|       1
---------------------------------------------------------------------------
  398-  428 (22.23/ 7.16)	..................QKEVMHRKITEeaLEKQ..........IQETEE.TE..RHCNA.L.
  429-  467 (69.18/37.45)	Y.........DKLHDVEEQKLMVEQHITE..MEAV..........LKERED.RL..HDVEE.QK
  468-  491 (32.75/13.95)	F.........T....V.......EQRITE..MQAV..........LKEHKD.KL..HDV.....
  492-  520 (39.53/18.32)	................EEQKLMVEHRITE..IRSV..........LKEREE.KL.....AE.SK
  521-  551 (20.92/ 6.32)	Y.......llQVLQ.ADKEKL..QQ...E..RDAA..........VSESQDlRL..KN......
 1367- 1400 (42.34/20.14)	Y.........DELQDTKKQKLLLEQHISE..IKSA..........AK...D.YV..QEITE...
 1401- 1447 (33.07/14.16)	YfiqesceeaKKFQKIKMDLLAMLQRVKD..VENL............NRNE.KMqrKDMEE..K
 1466- 1500 (45.60/22.24)	Y.........HELKDVKEQKLCLE.R.....LDS...........SKETKR.RR..KAESEmLS
 1502- 1540 (22.35/ 7.24)	L.........KKVHDLEHQYL...NELKR..REAVeetfarqkeeIQETKR.EL..........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     390.23|      62|      91|     635|     696|       2
---------------------------------------------------------------------------
  584-  631 (75.33/53.47)	.....IG..EGGFGSV.Y....KGTLRN....TTVAIKLLHPHSMQGQPEFDQEI.AVLS..RVRHP
  632-  693 (116.28/87.39)	NLVTLIGSCREAFGLV.YEFLPKGSLED....RLACLNNTPPLTWQVRTRIIYEMCSALSFLHSNKP
  694-  730 (26.97/13.41)	HPIVH.GDLKPANILLdANFVSK..LGDfgicRLLIQTNT...........................
 1626- 1668 (56.37/37.76)	.....IG..TGRFMNV.Y....KGFIRN....TAITVMLLHPQGLQGQLEFHQEV.VVLS.......
 1674- 1735 (115.27/86.55)	NVMMLIGACPEAFGMV.YEFLPNGSLED....QLSCKKNTPPLTWKMRTRIIGEICSALTFIHSQKP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     899.86|     199|    1025|     739|     942|       3
---------------------------------------------------------------------------
   46-  134 (29.60/10.08)	.........................................................................................................PPLAAAadkvfvavaaDVKYG.....KSALQwALQNLAKDGAKVVIAHVHcpaQMIpmmgAKVHYT....KMNTKQVNDYRNKEREKA...EEKLDEYLLI.................
  744-  942 (375.63/238.61)	TTPKGTFAYMDPEFLTTGELTPRSDVYSLGIIILRLLTGKPPQKIAEVVEDAIESGGLHSILDPSAGSWPFVQANQL.AHLGLRCAEMSRRRRPDLATDVWKVVEPLMKAA..........SLTAG.....RPSFV.ARPDDSPPPSYFVCPIFQ...EEM....NDPHIAADGFTYEAEAIKGWLDSGHDTSPMTNLTLEHRELIPNRALRSAILEWQQQRQ
  955- 1094 (135.78/81.02)	....................................................LQLHGLVLLISQRQEAAMDSDGEEYdAMWSARCSVSSSAGSLQDAGDQWD..EQSLAAGedkvfvavdeDVEHG.....KSTFLwALQNLSTDGANIVLAHVHspaQTL....SKVHCT....RMKPEEISEYLMLAKEEA...EKNLDEYALIAKST.............
 1771- 1970 (358.85/227.40)	NNTSGTSSYIDPEFLSTGELAPRCDVYSFGIIILHLLTGKSPQNITTIVEDAMEKRQLHSIMDTSAGSWPFVQANQL.AHLGLRCANLSGRHRPDLTGEVWGVIKPLLKDA..........S....qnfgcKQAFE.ALSDDTQAPSYFICPILQ...EVM....TDPHIAADGYTYEANAIRNWLDGGNARSPMTNLSLENRELTPNRVLRSAILEWRQHRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     702.19|     210|     957|     136|     392|       4
---------------------------------------------------------------------------
  136-  392 (339.45/344.41)	RKLKVSCEKLIIEEDDIAKGLTDLVALHGVTKLVMGAAADKHYSRKMNTPKSKTALKILEAADPSCKIWFTCKGHLICTREANTTVPAI..PP..SPAHTVASTLSsssiSSRMRSMSLHPSESEASSSSGSpRHNLNRSRTevakypsqgsgtapsqlfghsDqDVNDQPTRTAMGSIdsWDEFERsQNSCYDSSRNSDTVRVSGSAM..QQPMYEP..DDD.HFVsprklensgddadiygrLQEALSETQDLKRETYEESTKQ
 1096- 1314 (362.74/260.45)	KDMKTDCQKVLIDMDDVAKGLEELITLHGITRLVMGAAADQHYSEEMKEPNSKIALKLMETASPSCKIWFTCNGHLICTREPNENLLAIyvPPaqSNTHFKPNEFD....RAEERSTKLRRIYFKIIGSIGN.ETGYGSLRT.....................D.DAISIPEATTLAAI..VDDTNK.QRSVMHSPQESDSVNFSSPACdpQQEEEEPnlDEDmHDI.................LNEACTRAELLKKEVDGESSKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.93|      18|      96|    1349|    1366|       5
---------------------------------------------------------------------------
 1349- 1366 (32.70/23.25)	LARQRLEIDEMKRRHNTL
 1448- 1465 (32.23/22.79)	IARQRMEIEETKRQRDEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.03|      28|    1039|     556|     583|       7
---------------------------------------------------------------------------
  556-  583 (51.26/39.39)	SMPGEDLNTEFSSYELEQATRGFDQELK
 1598- 1625 (49.77/37.99)	SMIATTQIADFSFFELRQATQDFDTALK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03823 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IVDDTNKQRSVMHSPQESDSVNFSSPACDPQQEEEEPNLDEDMHDIL
2) SISSRMRSMSLHPSESEASSSSGSPRHNLNRSRTEVAKYPSQGSGTAPSQLFGHSDQDVNDQPTRTAMGSIDSWDEFERSQNSCYDSSRNSDTVRVSGSAMQQPMYEPDDDHFVSPRKLENSGDDADIYGRLQEALSETQDLKRETYEESTKQLENLYQK
1247
240
1293
399










Molecular Recognition Features






MoRF SequenceStartStop




NANANA