<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03783

Description Uncharacterized protein
SequenceMATAGSSSPYSGDSPEPSFSGDKVYVAVGEESSRGTLLWALHKFPQVTAFVLLHVYSPPNFLPILGTKIPAVQLREQELIAHKKMNLQRISVNLDQYQLICAQQKVQAEKLVVESDDVAHGLVDLISEHNVSMLVMGAADDKHYTKRAAPFGHDVMQDCSLSATSAQCSVERSSSLSEIWCVSNTWLHKLNLEPHIETTSSDRYSDKEKEDTKERDESDNELQHIPMLLERVRQEAYEEKCRREKAEQDLFEALQKAQVSENLYFGELKQRNEIEVKLATTMEEVDRLARTADELAAKLQEQREKILVLEKRSTHSDRIIKDLMLQRDKAVREAEAIRIKNGESTAIADRTIPITELSISEIKEATNNFDHSSKVGESVYGSVYKGLLRQTNVAVKKLNPENTQSLSQFNHEVEILSRVRHPNLVTLIGACKDARALVYEYMPNGSLDDRLACKDNSKPLSWQLRTRIASNICSALIFLHSNKPHSIVHSDLKASNILLDGNNVAKLSGFGVCRMLTDEFKATTTLYRHTHPKGSFVYIDPEYAISGDLTPLSDVYSFGIILLRLLTGRSGFGLLKDVQGAVAKGCLQAILDSSAGDWPLMHAEQLSRVGLRCCEIRRKNRPDLQTEVWTVLEPMLRSASSMLCSLSFKSVSEDFGNVPSYFICPIQQDVMRDPLIAVDGFTYEAEAIREWFDSGHYTSPMTNLDLPHRDLLPNHALRSAIQEWLQRGQEKMDEEEIHIAVGKNFRKEKANILWAATRFPRATIVLVHVHWPSKWMPFMGGKVLYKFADEKEKEMHRAKETDAMVKMLSQYKNLCGTRKVRAHYLSHDDVLAGVVNLIKKLKIKRIVVGSRSMSKEAMLRKCCQHTGSIGYGGSAESLASVHELSDNSNGYSTPPSDFADEIIYDDGVIQMDGADELATCDVQESETEDEESIETGELNYYEEEVEHSSEETAHKTDETQSFRSITERAEELMEEIDRLQRKLKELQEEEDDSDEKSILSPRQKAAAASLKKEKRLSSTGRYPELQLPQHISRFSMSMISKATDNFYSRNLIGEGGYGPVYKGKLGGVTVAIKLLRPHGRQGFPEYKQEVLVLSRMEHPHIVKLIGVCPESCGLVYEHLPNGTLLDTLSNSNSKALSLSWKDRVRILAEQRSALAYLHSCRPHAIIHADLKLTNILLDAANSSRLGDFGTARTVHVKPLQDEEDTICRRTNPMGTTGYMDPVFFITGELTAESDVYAFGVVVLQVLTGLLDLNIADQVREAVKMDAVHSVLDASAGSWPEVQAAKLLRLALRCCSLERKRRPTITCDAEWRSLHILLAMAKSPAKSRKWTSSIHGS
Length1336
PositionTail
OrganismOryza punctata (Red rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.394
Instability index47.70
Isoelectric point6.02
Molecular weight149997.84
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03783
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|    1469.47|     390|     675|     235|     641|       1
---------------------------------------------------------------------------
  190-  629 (619.30/462.74)	LNLEPHIETTSSdrysdkekedtkerdesdnelqhipmllervrqEAYEEKCRREKAEQDLFEALQKaqVSENLYFGELKQRNEiEVklattMEEVDRLARTAD...ELAAK.LQEQREKILVLEKRSTHSDRIIKDLMLQRDKAVREAEAIR..IKNGESTAiadrtiPITELSISEIKEATNNFDHSSKVGESVYGSVYKGLLRQTNVAV.KKLNPENTQSL...SQFNHEVEILSRVRHPN.LVTLIGACKDARALVYEYMPNGSLDDRLACKDNS..K..PLSWQLRTRIASNICSALIFLHSNKPHSIVH..SDLKASNILLDGNNVAKLSGFGVCRM.....LTDEfkaTTTLYRHTHPKGSFVYIDPEYAISGDLTPLSDVYSFGIILLRLLTGRSGFGLLKDVQGAVAKGCLQAILDSSAGDWPLMHAEQLSRVGLRCCEIRRKNRPDLQTEV.W
  630-  862 (253.21/167.17)	TVLEPMLRSASS............................................................................................mlcSLSFKsVSEDFGNVPSYFICPIQQD.VMRDPLIAVDGFTYEAEAIRewFDSGHYTS......PMTNLDLPH.RDLLPNHALRSAIQEWLQRGQEKMDEEEIHIAVgKNFRKEKANILwaaTRFPRATIVLVHVHWPSkWMPFMGG.....KVLYKFADEKEKEMHRAKETDAmvK..MLS.QYKNLCGTRKVRAHYLSHDDVLAGVVNliKKLKIKRIVVGSRSMSKEAMLRKC..........................................................................................................................
  934- 1310 (596.95/408.29)	.............................................ETGELNYYEEEVEHSSEETAHK..TDETQSFRSITERAE.EL.....MEEIDRLQRKLK...ELQEE.EDDSDEKSILSPRQKAAAASLKKEKRLSSTGRYPELQLPQ................HISRFSMSMISKATDNFYSRNLIGEGGYGPVYKGKLGGVTVAI.KLLRPHGRQGF...PEYKQEVLVLSRMEHPH.IVKLIGVCPESCGLVYEHLPNGTLLDTLS.NSNS..KalSLSWKDRVRILAEQRSALAYLHSCRPHAIIH..ADLKLTNILLDAANSSRLGDFGTARTvhvkpLQDE...EDTICRRTNPMGTTGYMDPVFFITGELTAESDVYAFGVVVLQVLTGLLDLNIADQVREAVKMDAVHSVLDASAGSWPEVQAAKLLRLALRCCSLERKRRPTITCDAeW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.90|      34|     140|       9|      43|       2
---------------------------------------------------------------------------
    9-   43 (57.49/41.72)	PYSGDSPEP.SFSGDKVYVAVgEESSRGTLLWA.....LHK
  150-  189 (52.42/32.70)	PFGHDVMQDcSLSATSAQCSV.ERSSSLSEIWCvsntwLHK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.57|      12|      17|     868|     879|       4
---------------------------------------------------------------------------
  868-  879 (20.51/11.87)	SIGYGGSAESLA
  888-  899 (23.06/14.31)	SNGYSTPPSDFA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03783 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ADELATCDVQESETEDEESIETGELNYYEEEVEHSSEETAHKTDETQSFRSITERAEE
914
971










Molecular Recognition Features






MoRF SequenceStartStop




NANANA