<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03782

Description Uncharacterized protein
SequenceMATAGSSSPYSGDSPEPSFSGDKVYVAVGEESSRGTLLWALHKFPQVTAFVLLHVYSPPNFLPILGTKIPAVQLREQELIAHKKMNLQRISVNLDQYQLICAQQKVQAEKLVVESDDVAHGLVDLISEHNVSMLVMGAADDKHYTKKMKVLKSRKAQVVEQHADPFCKIWFICKGTLVYCRRAAPFGHDVMQDCSLSATSAQCSVERSSSLSEIWCVSNTWLHKLNLEPHIETTSSDRYSDKEKEDTKERDESDNELQHIPMLLERVRQEAYEEKCRREKAEQDLFEALQKAQVSENLYFGELKQRNEIEVKLATTMEEVDRLARTADELAAKLQEQREKILVLEKRSTHSDRIIKDLMLQRDKAVREAEAIRIKNGESTAIADRTIPITELSISEIKEATNNFDHSSKVGESVYGSVYKGLLRQTNVAVKKLNPENTQSLSQFNHEVEILSRVRHPNLVTLIGACKDARALVYEYMPNGSLDDRLACKDNSKPLSWQLRTRIASNICSALIFLHSNKPHSIVHSDLKASNILLDGNNVAKLSGFGVCRMLTDEFKATTTLYRHTHPKGSFVYIDPEYAISGDLTPLSDVYSFGIILLRLLTGRSGFGLLKDVQGAVAKGCLQAILDSSAGDWPLMHAEQLSRVGLRCCEIRRKNRPDLQTEVWTVLEPMLRSASSMLCSLSFKSVSEDFGNVPSYFICPIQQDVMRDPLIAVDGFTYEAEAIREWFDSGHYTSPMTNLDLPHRDLLPNHALRSAIQEWLQRGQEKMDEEEIHIAVGKNFRKEKANILWAATRFPRATIVLVHVHWPSKWMPFMGGKVLYKFADEKEKEMHRAKETDAMVKMLSQYKNLCGTRKVRAHYLSHDDVLAGVVNLIKKLKIKRIVVGSRSMSKEAMLRKCCQHTGSIGYGGSAESLASVHELSDNSNGYSTPPSDFADEIIYDDGVIQMDGADELATCDVQESETEDEESIETGELNYYEEEVEHSSEETAHKTDETQSFRSITERAEELMEEIDRLQRKLKELQEEEDDSDEKSILSPRQKAAAASLKKEKRLSSTGRYPELQLPQHISRFSMSMISKATDNFYSRNLIGEGGYGPVYKGKLGGVTVAIKLLRPHGRQGFPEYKQEVLVLSRMEHPHIVKLIGVCPESCGLVYEHLPNGTLLDTLSNSNSKALSLSWKDRVRILAEQRSALAYLHSCRPHAIIHADLKLTNILLDAANSSRLGDFGTARTVHVKPLQDEEDTICRRTNPMGTTGYMDPVFFITGELTAESDVYAFGVVVLQVLTGLLDLNIADQVREAVKMDAVHSVLDASAGSWPEVQAAKLLRLALRCCSLERKRRPTITCDAEWRSLHILLAMAKSPAKSRKWTSSIHGS
Length1371
PositionTail
OrganismOryza punctata (Red rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.06
Grand average of hydropathy-0.386
Instability index47.09
Isoelectric point6.22
Molecular weight154134.86
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03782
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      80.55|      21|      21|     320|     340|       1
---------------------------------------------------------------------------
  307-  324 (19.19/ 9.34)	...NEIEVKLATTMEEV...DRLA
  325-  348 (24.80/14.25)	RTADELAAKLQEQREKIlvlEKRS
  349-  364 (16.45/ 6.94)	THSDRIIKDLMLQRDK........
  367-  385 (20.11/10.15)	REAEAIRIKNGESTAIA...DR..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|    1130.74|     286|     675|     387|     676|       2
---------------------------------------------------------------------------
  388-  676 (493.42/282.23)	PITELSISEIKEATNNFDHSSKVGESVYGSVYKGLLRQTNVAV.KKLNPENTQSL...SQFNHEVEILSRVRHPN.LVTLIGACKDARALVYEYMPNGSLDDRLACKDNS..K..PLSWQLRTRIASNICSALIFLHSNKPHSIVH..SDLKASNILLDGNNVAKLSGFGVCRM.....LTDEfkaTTTLYRHTHPKGSFVYIDPEYAISGDLTPLSDVYSFGIILLRLLTGRSGFGLLKDVQGAVAKGCLQAILDSSAGDWPLMHAEQLSRVGLRCCEIRRKNRPDLQTEV.WTVLEPMLRSASS
  735-  897 (161.64/82.12)	PMTNLDLPH.RDLLPNHALRSAIQEWLQRGQEKMDEEEIHIAVgKNFRKEKANILwaaTRFPRATIVLVHVHWPSkWMPFMGG.....KVLYKFADEKEKEMHRAKETDAmvK..MLS.QYKNLCGTRKVRAHYLSHDDVLAGVVNliKKLKIKRIVVGSRSMSKEAMLRKC......................................................................................................................................
 1065- 1357 (475.67/262.53)	HISRFSMSMISKATDNFYSRNLIGEGGYGPVYKGKLGGVTVAI.KLLRPHGRQGF...PEYKQEVLVLSRMEHPH.IVKLIGVCPESCGLVYEHLPNGTLLDTLS.NSNS..KalSLSWKDRVRILAEQRSALAYLHSCRPHAIIH..ADLKLTNILLDAANSSRLGDFGTARTvhvkpLQDE...EDTICRRTNPMGTTGYMDPVFFITGELTAESDVYAFGVVVLQVLTGLLDLNIADQVREAVKMDAVHSVLDASAGSWPEVQAAKLLRLALRCCSLERKRRPTITCDAeWRSLHILLAMAKS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.97|      19|      19|      72|      90|       3
---------------------------------------------------------------------------
   72-   90 (31.02/24.49)	VQLREQELI.AHKKMNLQRI
   92-  111 (25.95/19.12)	VNLDQYQLIcAQQKVQAEKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.74|      22|      30|     230|     251|       4
---------------------------------------------------------------------------
  230-  251 (37.18/25.61)	HI....ETTSSDRYSDKEKEDTKERD
  259-  284 (32.56/21.42)	HIpmllERVRQEAYEEKCRREKAEQD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.03|      27|      43|     151|     177|       5
---------------------------------------------------------------------------
  151-  177 (48.42/30.95)	LKSRKAQVVEQHADPFCKIWFICKGTL
  196-  222 (46.61/29.51)	LSATSAQCSVERSSSLSEIWCVSNTWL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03782 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ADELATCDVQESETEDEESIETGELNYYEEEVEHSSEETAHKTDETQSFRSITERAEE
949
1006










Molecular Recognition Features






MoRF SequenceStartStop




NANANA