<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03774
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAAGELGQQRVELGAVVQRAAEESYLSLRELVEKSQAEGEGKGGAYGARQRSDSEKKIDLLKFIARTRQRMLRLHVLAKWCQQVPLVNYCQQLGSTLSSHETCFTQTADSLYFMHEGLQQARAPMFDIPSALEVMLTGNYQRLPLCIEDIGSQNKLSPDEEKRALQKLDASVRYKVLVTPRPKEVSNFSVADGIAVFRVDGEFKVLLTLGYRGHLDLWRILHLELLVGDKGGPIKLEERRRFALGDDIERRMAVSENPFMVLYAILHELCISLAMDTIIRQTNVLRQGRWKDAIRSELVSDSTTGQTGNAPLMQLGQDGEYDLSGSRIPGLKINYWLDEKVGGSAESDSSPFIKIEAGQDMQIKCQHSSFILDPLTDKEANLSLDLCCIDVEQLILRAIACNRHTRLLDIQRQLSKNVQISQSPKDVILKRDVEIAKDLVKKTEQKDFADCCGNEVLQVRAYGQAYSPENILPPSALLDCEEALNKGSITATDAFASLRTRSILHLFAATGSFFGLKVYEKSQGTLKIPKDILHGSDLMVMGFPQCANAYYLLMQLDKDFRPVFHLLETQSDASDKTNTNACTKEALRFNKIDIGQIHISKSEPNANMFDVKLHALQNIGNCDDVMENRLPIQSGIEPLPLLPACSPSFSSVVDEVFEYEHGALAVPNHSLPQTTLQSTSHPGSLSVGFQGAGTRANASIQEGVSSAYSGSKFSPGVSLNSYLPSNLRHVQSTNAFSSSTVTKSSSIKLPSSNSNHELSSLSSPTEHVFADGSKSLQLVPSSKINGSINLITMGSDGASRKRSISDLFLNLPSLQGLKPSSPRKRRKISESMESWSPLQAYSSDSQSRTSLTYGNILAERNNCVPATTYASVLLHVIRHCSLSIKHAQITAQMDSLAIPYVEEVGLRSPSSNLWLRLPFARDDSWKHICLRLGKAGSMSWDVRINDPHFRELWELSTGSTTTSWGVGVRVANTSEMDSHISFDAEGVILTYSNVEPDSVQKLVSDLRRLANARSFARGMRRLIGIKLNDKLDDDQTSTDIKSQPVNKGNSDAADRLSEQMRKTFRIEAVGLMSLWFSYGTMPMVHFVVEWESAKGGCTMHVSPDQLWPHTKFLEDFVNGGEVASFLDCIRLTAGPLLALGGAIRPARMPVTVSSGYNSMPKQTNNIPTQGPLTNGSSSTTMHHAPAPANAAATHLGSHNLHTAAMLSAAGRGGPGLVPSSLLPFDVSVVLRGPYWIRIIYRKKFSVDMRCFAGDQVWLQPATPPKGGPLVGGSLPCPQFRPFIMEHVAQGLNALEPSFMNATQGGAHLNSSAGTLQSAPNANRVNATQGIGMSRPASGVANHVAANLSRAGNAMLASSGLASGIGGASVRLTSGANLPVHVKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPELLKEILGSILKENEGALLNLDQEQPALRFYVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQAQNNAQEELTPPEINEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGFSQAHGDIATAQRARIELCLENHSGSVSDDITESTLAKSNVKYDRAHSSLEFALTFVLDHALIPHMNVAGGAAWLPYCVSVRLRYSFGESNHIAYLAMDGSHGGRACWLQYEDWERCKQKVARAVETVNGSVAVGESGQGRLRMVAEMIQKQLQLCLQQLRDGPLSAGSTAS |
Length | 1726 |
Position | Tail |
Organism | Oryza punctata (Red rice) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.202 |
Instability index | 49.04 |
Isoelectric point | 7.72 |
Molecular weight | 188797.84 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03774
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 345.85| 110| 132| 1140| 1271| 1
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1140- 1266 (170.25/137.47) GGAI....RPARMPvTVSSGYNSMPKQTNNiPTQGPLTNGSSSTTMHHAPAPANAAATH........LGSHNlHTAAMLSaagRGGPGLVPSSLLPFDVsvvlrGPYWIRIIYRKKFSVDMRcfaGDqvwLQPATPPKG
1272- 1393 (175.60/108.90) GSLPcpqfRPFIME.HVAQGLNALEPSFMN.ATQGGAHLNSSAGTLQSAPNANRVNATQgigmsrpaSGVAN.HVAANLS...RAGNAMLASSGLASGI.....GGASVRLTSGANLPVHVK...GE...LNTAFIGLG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 81.49| 25| 105| 206| 230| 2
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206- 230 (45.07/29.26) LLTLGYRGHLDL..WRI..LHLELLVGDK
312- 340 (36.42/22.17) LMQLGQDGEYDLsgSRIpgLKINYWLDEK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 379.17| 107| 135| 434| 544| 4
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371- 432 (62.19/37.11) .......................................ILDP..LTDKE.ANL.SL.DLCCIDV......EQL...ILRAI.ACNRHTRLL..DIQRQLSKNVQIsqsPKDVILKRD.......
434- 544 (173.76/132.90) EIAKDLVKKTEqkdfADCCGNEVLQVRA..YGQAYSPENILPPSALLDCE.EAL.NKGSITATDAFAS.LRTRS...ILHLF.AATGSFFGL..KVYEKSQGTLKI...PKDILHGSDLMVMGFP
568- 682 (143.22/99.66) ETQSDASDKTN....TNACTKEALRFNKidIGQIHISKS.EPNANMFDVKlHALqNIGN..CDDVMENrLPIQSgiePLPLLpACSPSFSSVvdEVFEYEHGALAV...PNHSLPQTTLQSTSHP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 66.40| 23| 136| 930| 961| 5
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906- 921 (24.47/ 9.09) .......LR..SPSSN........LW...LRL..PFAR
923- 950 (35.95/27.97) DSWKhicLRlgKAGSM........SW..DVRINDPHFR
951- 972 ( 5.98/ 8.43) ELWE............lstgstttSWgvGVRVAN....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.55| 12| 31| 744| 755| 11
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744- 755 (21.55/12.16) SSSIKL.PSSNSN
773- 785 (17.00/ 7.92) SKSLQLvPSSKIN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.54| 14| 18| 1402| 1416| 13
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1402- 1416 (19.35/19.89) WVpLAALKKVLRGIL
1423- 1436 (25.19/18.59) WL.FAQLPELLKEIL
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