<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03771
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGELGQQTVELGAVVRRAAEDSYLALRELVEKSRVEAEGKNGQQRSDTEKKIDLLKFIDRTRQRMLRLHVLAKWCQQVPLVHYCQQLASTLSSHETCFTQTADSLFFMHEGLQQARAPIFDVPSAIEVLHTGSYRRVPKCVEEIGTQNTLFQDEQKPTLKKLSTLVRAKLLEISLPKEISEVSVTDGIANVQVDGEFKVLITLGYRGHFSLWRILHMELLVGEKAGPIKLEETRRYALGDDIERRMAVADNPFMILYTILHELCISLVMDTVIRQTNVLRQGRWKDAIKSELISDIHSGAGQGGSNAVMQLGQDGELDSSGSRIPGLKINYWLEEKTNASAESDSSPFIKIEAGQDMQIKCQHSSFVLDPFTDKEADLSIDLSCIDVEALILKAIACNRHTRLLEIQRELMKNVQMSQSPTEVILKQEVHGEGFQKKVNRRDSSDCCTDEMLKVRAYGQSYIDLGINIRNGRFLLQSLGNILPPSAVLDSEEALNKGSTTATDVFVSLRTRSILHLFAATGSSLGLKVYSQSQVTLKIPKSILCGSEFMVMGFPQCANAYYLLMQLDNSFKPVFCLLEIQNNEGDNNNADATTDAKEAIRFIRIDINKLKIDEDVQIANFFDKDKLLALQNVEDRPQRQSGTDEPLPARPSFSSVVDEVFGYDRGSPITESQRLPSNSLPSSHSSYQVGLHGVSGGAGSPDQDYGSLQSNINTAKVTSGTGLNNYLLSNSKHAQSTSAFSGSVSAGLGNISSSRSEGAYKKCSLSEFLQNIPLSKQSIIGDGPSKRRKVSEFMLDGLPLKANSPSMQPGTPLTYGKLLEEVNNCITANIYSSVLLHVIKHCSICIKYAQLTAQMDSLNIPHVEEVGMPTPSSNLWLCLPFAHDASWKHICLNLGKAGSMSWDVRINDPHYGALWKLHGGSTTTEWGSGVRVANTSEVDSHISFDDDGVLLTYNTVEADSIQRLVSDLQRLSHARAFSCGMRRLIGVKLDGKLAEHQTTAETKLHSRRKASRDRLSEQMRKTFRIEAVGLMSLWFSYGAVPMVYFVVEWETGKSSCTLRVSPDQLWPHTKFLEDFVNGDEIASFLDCIRLTAGPLLALGGAIRPAKMPVTVPAGYSALPKQNNILTTVGSANSLSSTVHNMSVPQGAAVAHSNSHLQTSSMLSAAGRTAPGLVPSSLLPFDVSVVLRGPYWIRIIYRNKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNALEPNLLNARHTGPPLNASVNTVSGSQQLAPSSNRFGGAPGIARPTSTVANQVASSLSRAGNAMIPSGFASGIAGAPAHLSPGNVPAHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPDLLKEILGSVLKDNEGALLNLDHEQPALRFFVGGYVFAVSVHRVQLLLQVLNVKRFHHQQQQQQQAPQNNGQEELTVPEISEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFIKLIAWKKSLPQAHADNATTHRARIELCLEKHPRLVSDDYTASSSSSKSNIHHDRANNSVDFALTFVLDQALVPHMSISGGAAWLPYCVSVRVKYTFGEDNHIAFLAMDGSHSGRACWLQHEDWERCKQRVSRAVETMNGSAAVGDMSQGRLRMVAEMVQKQLQLSLLQLRDSPVSTGSAAS |
Length | 1685 |
Position | Tail |
Organism | Oryza punctata (Red rice) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.191 |
Instability index | 49.55 |
Isoelectric point | 7.06 |
Molecular weight | 184760.37 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03771
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 36.56| 11| 18| 815| 825| 1
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815- 825 (20.21/11.51) YGK.LLEEVNNC
831- 842 (16.35/ 8.02) YSSvLLHVIKHC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 100.09| 31| 360| 1197| 1236| 2
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1197- 1231 (49.50/33.89) RNKFSVDMR.CFAGDQVwLQPATPPKGGPSVggsLP
1558- 1589 (50.59/21.76) RANNSVDFAlTFVLDQA.LVPHMSISGGAAW...LP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 307.86| 91| 362| 113| 215| 3
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124- 215 (146.94/123.38) PSAI....EVLHTGSYRRVPKCVeEIGTQNTLFQDEQKPTLKKLSTLVRAKLLEI..SLPKEI......SEV......................SVTDGIANVQVDGEFKVLITL..GYR.GHF...SLWRI
393- 482 (38.57/17.17) ........................................LKAIACNRHTRLLEIqrELMKNVqmsqspTEVilkqevhgegfqkkvnrrdssdCCTDEMLKVRAYGQSYIDLGI..NIRnGRFllqSLGNI
485- 580 (122.36/78.28) PSAVldseEALNKGSTTATDVFV.SLRTRSILHLFAATGSSLGLKVYSQSQ.VTL..KIPKSI...lcgSEF......................MVM.GFP..QCANAYYLLMQLdnSFK.PVF...CLLEI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 263.61| 92| 670| 266| 385| 4
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266- 385 (125.97/119.00) ISLVMDTVIRQTNVLRqgrwKDAIKsELISDI....HSGAGQGGSNAVMQLGQDGELDssgsripglkinywlEEKTNA........SAESDS......SPFiKIEAGQDMQIKCQHSS.....FVLDPFTDKeadlSidlSC
942- 1056 (137.64/73.32) ISFDDDGVLLTYNTVE....ADSIQ.RLVSDLqrlsHARAFSCGMRRLIGVKLDGKLA...............EHQTTAetklhsrrKASRDRlseqmrKTF.RIEAVGLMSLWFSYGAvpmvyFVVEWETGK....S...SC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 93.63| 29| 31| 1285| 1313| 6
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1285- 1313 (49.75/30.19) GGAPGIA.RPTSTVANQVASSLSRAGN.AMI
1316- 1346 (43.88/25.70) GFASGIAgAPAHLSPGNVPAHMKGELNtAFI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 76.76| 18| 23| 766| 785| 7
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745- 760 (25.26/10.98) SAG.LGNISSSR....SEGAY
766- 785 (29.57/19.79) SEF.LQNIPLSKQSiiGDGPS
791- 806 (21.93/ 8.61) SEFmLDGLPLKANS.....PS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.82| 18| 363| 700| 719| 8
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700- 719 (26.68/22.39) SPDQDYgsLQSNINTAKVTS
721- 738 (31.14/18.84) TGLNNY..LLSNSKHAQSTS
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