<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03770
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGELGQQTVELGAVVRRAAEDSYLALRELVEKSRVEAEGKNGQQRSDTEKKIDLLKFIDRTRQRMLRLHVLAKWCQQVPLVHYCQQLASTLSSHETCFTQTADSLFFMHEGLQQARAPIFDVPSAIEVLHTGSYRRVPKCVEEIGTQNTLFQDEQKPTLKKLSTLVRAKLLEISLPKEISEVSVTDGIANVQVDGEFKVLITLGYRGHFSLWRILHMELLVGEKAGPIKLEETRRYALGDDIERRMAVADNPFMILYTILHELCISLVMDTVIRQTNVLRQGRWKDAIKSELISDIHSGAGQGGSNAVMQLGQDGELDSSGSRIPGLKINYWLEEKTNASAESDSSPFIKIEAGQDMQIKCQHSSFVLDPFTDKEADLSIDLSCIDVEALILKAIACNRHTRLLEIQRELMKNVQMSQSPTEVILKQEVHGEGFQKKVNRRDSSDCCTDEMLKVRAYGQSYIDLGINIRNGRFLLQSLGNILPPSAVLDSEEALNKGSTTATDVFVSLRTRSILHLFAATGSSLGLKVYSQSQVTLKIPKSILCGSEFMVMGFPQCANAYYLLMQLDNSFKPVFCLLEIQNNEGDNNNADATTDAKEAIRFIRIDINKLKIDEDVQIANFFDKDKLLALQNVEDRPQRQSGTDEPLPARPSFSSVVDEVFGYDRGSPITESQRLPSNSLPSSHSSYQVGLHGVSGGAGSPDQDYGSLQSNINTAKVTSGTGLNNYLLSNSKHAQSTSAFSGSVSAGLGNISSSRSEGAYKKCSLSEFLQNIPLSKQSIIGDGPSKRRKVSEFMLDGLPLKANSPSMQPGTPLTYGKLLEEVNNCITANIYSSVLLHVIKHCSICIKYAQLTAQMDSLNIPHVEEVGMPTPSSNLWLCLPFAHDASWKHICLNLGKAGSMSWDVRINDPHYGALWKLHGGSTTTEWGSGVRVANTSEVDSHISFDDDGVLLTYNTVEADSIQRLVSDLQRLSHARAFSCGMRRLIGVKLDGKLAEHQTTAETKLHSRRKASRDRLSEQMRKTFRIEAVGLMSLWFSYGAVPMVYFVVEWETGKSSCTLRVSPDQLWPHTKFLEDFVNGDEIASFLDCIRLTAGPLLALGGAIRPAKMPVTVPAGYSALPKQNNILTTVGSANSLSSTVHNMSVPQGAAVAHSNSHLQTSSMLSAAGRTAPGLVPSSLLPFDVSVVLRGPYWIRIIYRNKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNALEPNLLNARHTGPPLNASVNTVSGSQQLAPSSNRFGGAPGIARPTSTVANQVASSLSRAGNAMIPSGFASGIAGAPAHLSPGNVPAHMKGELNTAFIGLGDDGGYGGGWVPLAALKKVLRGILKYLGVLWLFAQLPDLLKEILGSVLKDNEGALLNLDHEQPALRFFVGGYVFAVSVHRVQLLLQVLNVKRFHHQQQQQQQAPQNNGQEELTVPEIILREFIKLIAWKKSLPQAHADNATTHRARIELCLEKHPRLVSDDYTASSSSSKSNIHHDRANNSVDFALTFVLDQALVPHMSISGGAAWLPYCVSVRVKYTFGEDNHIAFLAMDGSHSGRACWLQHEDWERCKQRVSRAVETMNGSAAVGDMSQGRLRMVAEMVQKQLQLSLLQLRDSPVSTGSAAS |
Length | 1652 |
Position | Tail |
Organism | Oryza punctata (Red rice) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.200 |
Instability index | 49.04 |
Isoelectric point | 7.17 |
Molecular weight | 181084.26 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP03770
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 1749.89| 545| 579| 484| 1062| 1
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108- 395 (139.56/62.15) ..............................................................................................................................................................................................................................................................................................................................................FMHE..G.LqqaraPI.FDVPSaievLHTGSYRRVPKCVEEIGTQNT..........LFQdeqkpTLKKL.STLVR.....AKLLEISLP..kEISEVSVTDGIANVQ..VDGE......FkvlitlgyrGHFSLWRilHMELLVGeKA.G....PIKLEETRRYAL..............GDDIERRMAVADNpfmilytilhelcISLV..MDTV......IRQTNVLRqgrwKDAIKsELISDI....HSGA.GQGGSNAVMQ.LGQDGELDssgsripglkinywlEEKTNA........SAESD......SSPFiKIEAGQDMQIKCQHSS.....FVLDPFTDKEadlsidlSCidveALILKA
484- 1062 (853.54/540.95) PPSAVLdsEEALNkGSTTAT..DVfVSLRTRSILHLFAA.TGSSLGLKV...YS....QSQVTLKIPKSILCGSEFMVMGFPQCANAYYllmqlDNSFKPVFCLLEI..QNNEGDNNNADATTDAKEAIR...FIRIDI.NKLKIDedvqiANFFDKDKLLaLQNVEDrPQRQSGTDEPLPArPSFSSVVDEvfGYDRGSPITEsqrlPsNSLPSSHSS..YQVGLHGVSGGAG.SPDQD.YGSLQsniNTAKVTSgTGLNNYL..LSNSKHAQSTSAFSGSVSAGLGNISSSrSEGAYKKCSLSEFLqnIPLSKQSIIGDG..P.SKRRKVSEFMLD..G.L.....PLKANSPS....MQPGTPLTYGKLLEEVNNCITANI...YSSVLLH.....VIKHC.SICIKYAQLTAQMDSLNIP...HVEEVGMPTPSSNLW..LCLP......F.........AHDASWK..HICLNLG.KA.GSMSWDVRINDPHYGALWKlHGGSTTTEWgsGVRVANTSEVDSH.............ISFD..DDGV......LLTYNTVE....ADSIQ.RLVSDLQRLSHARA.FSCGMRRLIG.VKLDGKLA...............EHQTTAETKLHSRRKASRDRLSEQMRKTF.RIEAVGLMSLWFSYGAVPMVYFVVEWETGKS.......SC....TLRVSP
1067- 1644 (756.79/409.13) PHTKFL..EDFVN.GDEIASflDC.IRLTAGPLLALGGAiRPAKMPVTVpagYSalpkQNNILTTVGSANSLSSTVHNMSVPQGAAVAH.....SNSHLQTSSMLSAagRTAPGLVPSSLLPFDVSVVLRgpyWIRIIYrNKFSVD.....MRCFAGDQVW.LQPATP.PKGGPSVGGSLPC.PQFRPFIME..HVAQGLNALE....P.NLLNARHTGppLNASVNTVSGSQQlAPSSNrFGGAP...GIARPTS.TVANQVAssLSRAGNAMIPSGFASGIAGAPAHLSPG.NVPAHMKGELNTAF..IGLGDDGGYGGGwvPlAALKKVLRGILKylGvL.....WLFAQLPD....L...LKEILGSVLKD.NEGALLNLdheQPALRFF.....VGGYVfAVSVHRVQLLLQV..LNVKrfhHQQQQQQQAPQNNGQeeLTVPeiilreF.........IKLIAWK..K.SLPQA.HAdNATTHRARIE....LCLEK.HPRLVSDDY.....TASSSSSKSN.............IHHDraNNSVdfaltfVLDQALVP....HMSIS.GGAAWLPYCVSVRVkYTFGEDNHIAfLAMDGS..................HSGRACWLQHEDWERCKQRVSRAVETMN.GSAAVGDM....SQGRLRMVAEMVQKQLQLS.......LL....QLRDSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.43| 18| 25| 418| 435| 3
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418- 435 (30.86/18.91) SQSPTEVILKQEVHGEGF
445- 462 (33.56/21.19) SDCCTDEMLKVRAYGQSY
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