<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03765

Description Uncharacterized protein
SequenceMVPAAGGGGEGGELERRVMAALKASEARGDQPLVWAVEVARVVAGEGTGLPSADLAGILVSNLCFAHNSPSLWKLVGHAVASRLLCPLHVLALLTPRVLPQRRAQPEAYRLYLELLRSNVTSSFLSMEPGPNRDKITKSIDDALQLSKIYGFSGIDAGHVIIFFMMFVITKLIDCTLEDCGFPSGLTEEQESIYAIEGPQDMDLDVKGVSTEKQSEHRAQLRRKSTVMALDVLIMMVADRKIQSFLRLIFLNMPEKFSALSQRLSLVEAHKVELETLLTANHKIDDLLMNIRRVSNTAYQPNNKRLLGVLGNMKYGGSMLGQFTGAGRAACWVIFDIYVENAIDGKHLSAISAIEVLKEMTKTLQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDSRLCMLLALIPLSIGAILKEEADVHGAQGSKSLPKKSGLVSSLQDLIQYSGLLVPPSSVVNAANAAASKAAAFKANYKSGGGNPAMMGQNDSSTKTVGNMLHLIVEACISRNLIDTSAYLWPGYVVSSGHLKDATLPQESPWLNFMQGAPLSGPLIDALIATPASSTTELDRLYHIALNGSEEEKSAAAKILCGASFVCGWNIQEYVVRMVVKLLSPPLPSNSSTQGSTSHYLAQMSTLNALLLGISYGDAIHIISLYGMVPDVAAALMPICEVFGSIPPPSNHKPAIVGEISVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLLLMRNNHIDFANSSANSRNSSNNIVPLNEVPAQPLYIDSFPKLRAWYFQNQACIASTLSGLCNKNPVHQVANKILSMICRKMNKPGVSSGNLSSTSSSSVSGSSVSTSDDYQRPTVPAWEFLEAVPFVLEAVLTACAHGRFSSRDLTTSEETPYLSCHRLRDLVDFLPASIAAIVSYFLAEITRGIWKMVPMNGTEWPSPGASLHSIEAEIKEILASAGIQIPSCYPRGVPPMLPLPMAALVSLTITFKLDKSSEYIHAISGQALENCAGGSSWPSMPIIAALWTQKVRRWHDFIILSCLRSPFGRDKDAVAQLIQSCFSSFLRSSCSGSDFTANRGVGALMGEAITGHGLQLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWADKLANGFSSSGPPQLKSGRTPLSSAACMAHQVAMLGGGLLCVAGGPLLVQVLYEETLPTLLLSAREESMKDPGPVSSTLQGYAMANMLFFCGSLLWGAERTSPVMKLSFLSRRPRVVGNHMDFMAGVLDGHILLGCDHGTWKAYVSRFVFLVVKFVPSWLQDIKLDTLKKIASGLRSWNEHDLALALLERGGPQAISSVVDTLL
Length1328
PositionTail
OrganismOryza punctata (Red rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.07
Grand average of hydropathy0.135
Instability index49.56
Isoelectric point7.51
Molecular weight144066.22
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03765
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     187.65|      67|     160|     380|     458|       1
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  380-  458 (90.28/88.76)	WisaLRLVQRArePLEGPIphLDSrlcmLLAlIPLSIGAILKE..EADVHGAQGSKSLPKK....SGLVS..SLQDLI..QYSGLLVPP
  544-  620 (97.37/59.88)	W...LNFMQGA..PLSGPL..IDA....LIA.TPASSTTELDRlyHIALNGSEEEKSAAAKilcgASFVCgwNIQEYVvrMVVKLLSPP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     264.20|      87|     508|     621|     784|       2
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  679-  784 (135.33/182.35)	SIPPPSnhkPaIVGEISVYSVFSCAFLCLLRLWkfykppqeyclagrgGSVRLELTLDYLLLMR.....NNHIDF...........ANSSANSRNSSNNIVPL..NEVPA..QPLYIDSFPK....LRAW
 1192- 1302 (128.87/56.20)	SMKDPG...P.VSSTLQGYAMANMLFFCGSLLW...............GAERTSPVMKLSFLSRrprvvGNHMDFmagvldghillGCDHGTWKAYVSRFVFLvvKFVPSwlQDIKLDTLKKiasgLRSW
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     308.37|      98|     160|     831|     939|       3
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  831-  939 (149.53/143.39)	SSTSSSSVSGSSV.STSDDYQRPTVP..AWEFLEAVPFVLEAVLTACAHGRFsSRDLTTSEETpYLSChrlrdLVDFLPASIAAivSYFLAeiTRGIWKM....VPMNGTEWP.SPG
  991- 1096 (158.84/115.49)	SSEYIHAISGQALeNCAGGSSWPSMPiiAALWTQKVRRWHDFIILSCLRSPF.GRDKDAVAQL.IQSC.....FSSFLRSSCSG..SDFTA..NRGVGALmgeaITGHGLQLPmAPG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.16|      40|     156|      80|     119|       4
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   80-  119 (69.81/56.31)	VASR.LLCPLHVLALLTPR...VLPQRRAQPEAYRLYLE.LLRSN
  237-  281 (52.35/39.88)	VADRkIQSFLRLIFLNMPEkfsALSQRLSLVEAHKVELEtLLTAN
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     146.42|      43|    1085|      29|      72|       8
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   29-   72 (70.01/43.30)	GDQPLVWAVEVARVVAGEGTGLPSADLAGILVSNLcFAHNSPSL
 1142- 1184 (76.41/42.53)	GRTPLSSAACMAHQVAMLGGGLLCVAGGPLLVQVL.YEETLPTL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.31|      11|     166|     312|     322|      10
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  312-  322 (23.24/14.01)	NMKYGG...SMLGQ
  478-  491 (18.07/ 9.23)	NYKSGGgnpAMMGQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.65|      32|     508|     121|     166|      11
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  121-  166 (46.64/60.18)	TSSFLSMEPGPNrdkitksiddALQLSKIYGfsgiDAGHVIIFFMM
  631-  662 (58.01/38.13)	TSHYLAQMSTLN..........ALLLGISYG....DAIHIISLYGM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03765 with Med33 domain of Kingdom Viridiplantae
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