<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP03756

Description Uncharacterized protein
SequenceMAVSSAAWVDWAAEYTKAAQAESRPPAEWASVVAAGDVPWSPGLAEILARTLLYGGGGGGGGGGGSGAAWKYAEAALAAGLASPALLLALLSTRVIPHRFTRPTAYRLYLELLRRHGFNFGFQMKAANFKKIMQLIDDNLGLSKIFGFSTCEPGVFVVEFTLCMLWQLVDAALDDEGLLELILDKKAHWPTRSDDVSAFDGTFSEQRIDKIDKLQKMNNVITIEIIGHLLHDKVITHILSLARENMQSQWAAFTNRLQLLITKSSTLQTSTVALEAFQQLNLDVCNIFRENKHWLRRKFHPIVASNPLSSPNGRCLGASYSAQWIPIDMYLEDCLDGSIAATNSIEILSGLVKALQAVNRATWHDAFLALWIASLRLVQREREPIEGPVPHLDTRVCMLLSITTLAIVDIIEESDSELNSNWKEKRTSDDLRKELMLSLQTLGDYESLLVPPPCIISAANQAASKAAMFVSGMNISSGYMENINDRTTNYSGNMWHLIVESCISRNLLETSVYYWPGYINSHVNSITHALPSQLAAWSSFMKGAPLTQSLVNVLVATPASSLAEVEKLYEVAVDGSDEDKVSAATILCGATLLRGWNFQEHTVRLVVKLLSSSDPVDLSGGESQLVKHGPMLNVIVTGISPVDYAPIFSFHGLIPELAAALMAICEVFGSLSPSVSWPLRTGEEISAHTVFSNAFILLLRLWKFNHPPLEYCVMGDGAPVGSQLTPEYLLLLRNSQVLSARSSAKNRNTQKQLPVTSNPSSEHSIFMDSFPKLKLWYRQHQACLASTLSGFAHGAPVHKNVDSLLNLMFRKANKGSTSIGSLSGSSSISNSSGPGVDDSHLWPQLPAWEILEAVPFVVDAALTACSHGRLFPRELATGLKDLTDFLPASLATIVSYFSAEVTRGVWKPAFMNGTDWPSPAANLSMVEEHIKKIVAATGVDVPRLVTGGSTLGTLPLPLAAFVSLTITYKLDKASERFLNLAGPALENLAASCPWPSMPIVAALWTQKVKRWSDFLVFSASRTVFHHNNDAVFQLLRSCFTATLGMSSTTSVCSCGGIASLLGHGFGSHCSGGLSPVAPGILYLRIFRCIKDCSILAEDILRLLMLSVKDIAETTVSRHRSDKVKKTKYVMRHGQVSLSSAMTQVKVAASLGATLVWLSGGTALVQSLLQEMLPSWFLSVHDLEQGSAASGGTVYKLSGHALAYFAVYSGMFAWGIDPTPVSRRRERVMWSHFEFLASALDGKISLGCDLSLWRAYVSGFLGLVVECTPCWVHEVDLRVLRRLSAGLRQWKEDELAVALLRRAGPEAMAAAAELIIDGDW
Length1319
PositionTail
OrganismOryza punctata (Red rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza.
Aromaticity0.08
Grand average of hydropathy0.140
Instability index42.42
Isoelectric point6.47
Molecular weight143717.74
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP03756
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     150.80|      48|      71|     842|     895|       1
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  842-  895 (65.26/85.92)	WPQlPAWEiLEAVPFVVDAALTACshGRLFPReLATGLKDLTDfLPASLATIVS
  916-  963 (85.54/72.90)	WPS.PAAN.LSMVEEHIKKIVAAT..GVDVPR.LVTGGSTLGT.LPLPLAAFVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.05|      31|     141|    1033|    1075|       2
---------------------------------------------------------------------------
  610-  641 (49.75/21.47)	LSSSDPVDLSGGESQLVKHGpMLNVIVTGISP
 1045- 1075 (59.30/28.26)	MSSTTSVCSCGGIASLLGHG.FGSHCSGGLSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     202.81|      74|     487|     183|     307|       4
---------------------------------------------------------------------------
  183-  285 (94.78/121.82)	LDKKAHW.PtrsddvsafdgtfseqrIDKI..DKLQ.KMNNVITIEIIGHLLhdKVITHIlslareNmQSQW.AAFtnrLQLLITKSSTLQTSTVALEA.FQQLNLDVC
  318-  397 (108.03/105.35)	ASYSAQWiP.................IDMYleDCLDgSIAATNSIEILSGLV..KALQAV......N.RATWhDAF...LALWIASLRLVQREREPIEGpVPHLDTRVC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     192.80|      62|      72|     643|     712|       5
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  643-  712 (89.45/64.80)	DYAPIFSfhGLIPELaAALMAICEVFGSLSPSVS......WPLrTGEEISAHTVFSNAFIlLLRLWKFNHpplEYC
  716-  783 (103.35/50.25)	DGAPVGS..QLTPEY.LLLLRNSQVLSARSSAKNrntqkqLPV.TSNPSSEHSIFMDSFP.KLKLWYRQH...QAC
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP03756 with Med33 domain of Kingdom Viridiplantae
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